Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1740 ATGTATTTAAGAACTCAACCCGCCATGCATGCACACCACCACATTCCAAGCTTCACCACTTCAACCATGGGAACTAAGTGCAAAACTATCTTATTTGAAAAAGTCCTCTTCGCAATAATAATTTACTTCATATTCTCCACAACAAACACAACCAAAGCCCTTGACACATCATGTGCTTCTCAACCCGACCTCACCATCATTCCCATCTACGGCAAATGCTCCCCATTCAAACCCACACCAGGCCCATGGCCCGACACAATCATCAACATGGCCTCCAAAGACCCAGCCCGCCTCAACTACCTCGCCTCCCTCGTGGCCCGAAAAAAGCCCATATCGTCAGCACCCATAGCTTCGGGCCAGGCCTTCAACATTGGTGGCTACGTGGTCCGGGCCCGTCTCGGCACACCTGGCCAACTCATGTTCATGGTTTTCGACACCAGCACTGACGAGGCCTGGGTCCCATGCACCGGCTGCACCAGTTGCCCGTCCACCTCCTCTCCTTTCTCCCCCACTGCCTCCGCCACCTACGGCGGCTCCATCACCTGCTCCGCCACAAAATGCTATCAGGCTCGTGGCGCACAAACATGCCCCAGAGACCCCGGCGCCACCTCCGCCTGCACCTTCAATCAGTCGTACGGCGGAGCGATGGTCTCCGCTACGCTCGTCCAGGACTCAATCTCTTTGGCAAGGGAAACAATCTCGAATTACGCTTTCGGATGCGTTAATTCTGTTTCTGGCGGGTCGATTCCAGCCCAAGGGCTTTTGGGATTGGGTCGTGGGCCCTTGTCTTTTATTTCACAGTCCCTGTCGCTCTATAAGGGCGTGTTCTCATACTGTCTTCCGAGTTTCCGATCCTACTATTTTTCCGGGTCGTTGAAACTCGGGCGTTCGGGTCAGCCCAGGAGGATCCAAACGACGCCGCTTTTGCGTAACCCACGCCGGCCCTCGCTTTACTACGTAAATCTCACCGGAGTGAGCGTGGGCCGGGTAAGGGTCCCTGTGCCACGGGAGTTTCTGGTGTTTAACCAGTACACGGGTTCGGGTACAATAATTGATTCGGGTACGGTTATAACCCGGTTCGTGCAGCCGGTTTACAATGCTATCAGGGACGAGTTTAGAAGACAGGTAAAAGGGCCATTTTCAAGTTTAGGTGCATTCGACACTTGTTTTCAAAAGACCTACGAAAAATTGGCACCAATCATCAAACTCCATTTTGAAGGCATGGACCTAAAGTTGCCATATGAGAACAGCCTCATACACAGTAGTTCTGGATCGTTGGCTTGTCTGGCGATGGCGGCTGCACCCAACAACGTGAACTCAATGTTGAATGTGATCGCCAACTTGCAGCAACAGAATCTTAGAATTCTGTTTGATATAGTTAATAATAAGGTTGGCATAGCCCGTGAGCTTTGTAACTAG 1419 0.5187 MYLRTQPAMHAHHHIPSFTTSTMGTKCKTILFEKVLFAIIIYFIFSTTNTTKALDTSCASQPDLTIIPIYGKCSPFKPTPGPWPDTIINMASKDPARLNYLASLVARKKPISSAPIASGQAFNIGGYVVRARLGTPGQLMFMVFDTSTDEAWVPCTGCTSCPSTSSPFSPTASATYGGSITCSATKCYQARGAQTCPRDPGATSACTFNQSYGGAMVSATLVQDSISLARETISNYAFGCVNSVSGGSIPAQGLLGLGRGPLSFISQSLSLYKGVFSYCLPSFRSYYFSGSLKLGRSGQPRRIQTTPLLRNPRRPSLYYVNLTGVSVGRVRVPVPREFLVFNQYTGSGTIIDSGTVITRFVQPVYNAIRDEFRRQVKGPFSSLGAFDTCFQKTYEKLAPIIKLHFEGMDLKLPYENSLIHSSSGSLACLAMAAAPNNVNSMLNVIANLQQQNLRILFDIVNNKVGIARELCN* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1740 472 Gene3D Acid Proteases 105 294 IPR021109 -
Ahy17g1740 472 ProSiteProfiles Peptidase family A1 domain profile. 127 467 IPR033121 -
Ahy17g1740 472 Pfam Xylanase inhibitor C-terminal 318 467 IPR032799 -
Ahy17g1740 472 PANTHER ASPARTYL PROTEASE AED3-LIKE 40 472 - -
Ahy17g1740 472 Pfam Xylanase inhibitor N-terminal 127 295 IPR032861 -
Ahy17g1740 472 SUPERFAMILY Acid proteases 120 471 IPR021109 -
Ahy17g1740 472 Gene3D Acid Proteases 295 472 IPR021109 -
Ahy17g1740 472 PANTHER ASPARTYL PROTEASES 40 472 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1740 Ahy-Chr17 42483200 42487089 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1740 117 472 Miscellaneous Gene Families AT1G77480 24.615 7.31e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1740 - - aip:107608124 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1740 17 42483200 42487089 Ahy17g1740 17 42483200 42487089 ECH
Ahy17g1740 17 42483200 42487089 Ahy8g0725 8 14238689 14240387 hybridization