Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1682 ATGGCATCATTTCCTTCTGCTTCTGCTGCTCTCATTACAACTCTTAAGCTCCAACCACAATTCAAAACACACCCACCAACCTCCCTTCCCATAGAAAAGAGTCAGGGCATTTCTTTGCAGAAAAGCAACTACTTCACGGATTTGGATCCCAAGAATCTTGATTTTCGTGAAACGATCTCGTTGACAAAACAAATGACAGAGCTGGACTCATCTTTCTATTTTCCCCTGTTGCAAGAATGCTTAGACAGGACATCTTTCCTGGATGCACAAGTTATTCATGGTCATGCCATTAAAACCGGAGCGCACCAAGATGTTTTCTTGATGTCATTTCTGGTCAATGTTTATGCTAAATGTGGTCGCATGGAAGCCGCACGCAAAGTATTCGACAAAATGCCAAGGAGAAATGTGGTGGGTTGGACTACATTGATGGTGGGTTATGTGCAGAAAATGCAGCCAGAGAATGCTATTTATGTGTTCCAAGAGATGTTGTATGCAGGGAGTTATCCTTCCAATTACACACTTGCCGTAGCTGTAAGCGCTTGTACATCAATGCGATCAGTTAAGTTAGGGAATCAGTTCCATGCTTACATAATCAAATACCAGATTGATTTTGACACTAGCATTTGCAATGCACTTTGTAGTTTATACTCCAAATGTGGCAAATTGAAATTAGCTCTCAGTGCATTTAGGAGAATCAAGGAAAAGAATGTTGTTTCTTGGACTGCTGCTATTTCTGCTTGTGGGGACAATGGTGACCCAATGACGGGTTTAAGACTTTTCGTTGATATGCTTTCTGAGGACACACAGCCTAATGAGTTAACTTTATCCAGTGTCTTGAGCCAGTGTTGTGAGATTCCATTATTAGAACTCGGGACTCAGGTTCATTCGCTGTCTGCTAAATTAGGATACCAGTCGAATCTGCGTATAAGGAATTCTTTATTGTATTTGTATCTCAAGTGTGGTTGCATTGATGAGGCACAAATTTTGTTTAGCGGAATGGATGATGTTAGTTTGGTTTCATGGAATGCAATGATTGCTGGGCATGCACAAATGATGGAGCTCACAAAGGATAATATTTCTGCTTGCCACTATGGAATTGAAGCACTCAAACTTTTCTCTGAGTTGCATCGGTTTGGCATGAAGCCAGACCTGTTTACCTTCTCAAGTGCCTTATGTGTCTGTAGTAGGATGGTGGCTTTAGAGCAGGGGGAACAGATTCATGCTCAGGCCATCAAAATCGGGTTCCTATCGGAAGTGGTAGTGGGGAGTTCACTGATTAATATGTACAATAAATGTGGAAGTATTGAGAGGGCAAGCAAAGCATTTCTAGAGATGTCTACTAGGACTATGATATCATGGACTTCCATGATTACAGCTTTTTCACAGCATGGTTGGTCTCAGCAAGCGTTGGAGCTTTTTGAGGACATGAAACTAACAGGAGTTAGACCAAACGCAGTCACTTTTGTTGGGGTTTTATCTGCTTGTCGCCATGCTGGCATGATCAGTGCGGCACTCACTTATTTTGAGATTATGCAGAAGGAGTACAAAATCATGCCTGTGATGGACCATTATGTTTGCCTTGTTGATTTGTTTGTGAAGTTTGGACGTCTAGACGAAGCTTTCAATATGATTAAGAAAATGGATTTCGAGCCTAGCGAGTATATCTTGTCAAACTTGGTAGCAGGTTGCCGAAGCCACGGTAATCAGGAGTTGGGGTTTCAAGCTGCCGAGCAGTTACTAAGTCATAAACCGAAAGATACCGAAACATATTTGTTGTTATTGGATATGTACCATTCTGTAGAGAGATTTGAGGATGTTTCTAGGGTGAAGAAGATAATGAAGGAGGAAAAAGTTGGAAAATTAAATGATTGGAGTTGGATCAGCATCAAAGAAAGAGTGTATCCATTTAAACCGAATGACAAGGAATTCCCTCAGAGTTCTCTAGTTTATGAATCATTGGAGGTTTTAATTTTCAAAGCAAAGAATCTTGGATATGAGATGCTAGAAACTATGGAGATAAGTGAAGAAGACAAGGAAGAAGAAGAAAAAATAACATCAACTTCCATTTATCACAGTGAGAAGCTGGCGATTACATTCGGATTGGAGAACTTGCCGAGTTCCTCGCCGATACGAGTAGTGAAGAGTACCTTAATGTGCAGAGATGGCCATGATTTTGTTAAGTATGTATCAACACTGACTGGTAGAGAAATCATTATCAAAGACAGTAAGCGGCTTCATAAATTTGTGAATGGACAATGCTCATGTGGGGATTTCGGTGTTTTATTCTGA 2289 0.4076 MASFPSASAALITTLKLQPQFKTHPPTSLPIEKSQGISLQKSNYFTDLDPKNLDFRETISLTKQMTELDSSFYFPLLQECLDRTSFLDAQVIHGHAIKTGAHQDVFLMSFLVNVYAKCGRMEAARKVFDKMPRRNVVGWTTLMVGYVQKMQPENAIYVFQEMLYAGSYPSNYTLAVAVSACTSMRSVKLGNQFHAYIIKYQIDFDTSICNALCSLYSKCGKLKLALSAFRRIKEKNVVSWTAAISACGDNGDPMTGLRLFVDMLSEDTQPNELTLSSVLSQCCEIPLLELGTQVHSLSAKLGYQSNLRIRNSLLYLYLKCGCIDEAQILFSGMDDVSLVSWNAMIAGHAQMMELTKDNISACHYGIEALKLFSELHRFGMKPDLFTFSSALCVCSRMVALEQGEQIHAQAIKIGFLSEVVVGSSLINMYNKCGSIERASKAFLEMSTRTMISWTSMITAFSQHGWSQQALELFEDMKLTGVRPNAVTFVGVLSACRHAGMISAALTYFEIMQKEYKIMPVMDHYVCLVDLFVKFGRLDEAFNMIKKMDFEPSEYILSNLVAGCRSHGNQELGFQAAEQLLSHKPKDTETYLLLLDMYHSVERFEDVSRVKKIMKEEKVGKLNDWSWISIKERVYPFKPNDKEFPQSSLVYESLEVLIFKAKNLGYEMLETMEISEEDKEEEEKITSTSIYHSEKLAITFGLENLPSSSPIRVVKSTLMCRDGHDFVKYVSTLTGREIIIKDSKRLHKFVNGQCSCGDFGVLF* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1682 762 Gene3D Tetratricopeptide repeat domain 55 194 IPR011990 GO:0005515
Ahy17g1682 762 Gene3D Tetratricopeptide repeat domain 295 412 IPR011990 GO:0005515
Ahy17g1682 762 Pfam PPR repeat family 235 283 IPR002885 -
Ahy17g1682 762 Pfam PPR repeat family 451 495 IPR002885 -
Ahy17g1682 762 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 449 483 IPR002885 -
Ahy17g1682 762 TIGRFAM PPR: pentatricopeptide repeat domain 111 137 IPR002885 -
Ahy17g1682 762 TIGRFAM PPR: pentatricopeptide repeat domain 451 485 IPR002885 -
Ahy17g1682 762 TIGRFAM PPR: pentatricopeptide repeat domain 238 272 IPR002885 -
Ahy17g1682 762 Pfam DYW family of nucleic acid deaminases 676 758 IPR032867 GO:0008270
Ahy17g1682 762 Gene3D Tetratricopeptide repeat domain 449 638 IPR011990 GO:0005515
Ahy17g1682 762 Gene3D Tetratricopeptide repeat domain 195 294 IPR011990 GO:0005515
Ahy17g1682 762 Pfam E motif 566 627 IPR046848 -
Ahy17g1682 762 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 104 138 IPR002885 -
Ahy17g1682 762 PANTHER OS01G0913400 PROTEIN-RELATED 68 701 - -
Ahy17g1682 762 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 236 270 IPR002885 -
Ahy17g1682 762 PANTHER PENTATRICOPEPTIDE REPEAT PROTEIN-RELATED 68 701 - -
Ahy17g1682 762 SUPERFAMILY TPR-like 104 605 IPR011990 GO:0005515
Ahy17g1682 762 Pfam PPR repeat 110 136 IPR002885 -
Ahy17g1682 762 Pfam PPR repeat 311 333 IPR002885 -
Ahy17g1682 762 Pfam PPR repeat 139 166 IPR002885 -
Ahy17g1682 762 Pfam PPR repeat 524 547 IPR002885 -
Ahy17g1682 762 Pfam PPR repeat 423 446 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1682 Ahy-Chr17 38194471 38197737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1682 73 758 Glycoside Hydrolase AT3G49170 33.573 6.93e-133 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1682 - - gmx:100781103 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1682 17 38194471 38197737 Ahy17g1682 17 38194471 38197737 ECH
Ahy17g1682 17 38194471 38197737 Ahy7g1766 7 65557918 65561150 hybridization