Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1497 ATGGGTTCATCAGGAGCTAGTTTGGGATCTAGCTCTTGGAGAAAACCGAAGCACCAACAACACTTCCAAGTGTGCTTTTGTTTCAAGAGGATATTCAAGCTTAAGGTGTCAGAACCGCCAGAGGAAATCCGAAGTATCTTTGAGAAGTTCTCGGAAAACAACAATGGCACGGTGATGAGTGTTGATGGGCTCTACAGATTCTTGGTTCGGTTCCAAGGAGAAAGGGATTGTGATGATACAAAACACAAGGCTCAAGCTATATTTGATAGTCACAAGCATCTCTTCTTGTTCCAAAGGAAAGGCTTTCATCTTGATGCATTCTTTCGCTATCTCTTAGGTGATGATAATGCCCCTCTTCTTCAGGTTGGTCATGACATGAGAAGCCCACTGGCCCATTATTTCTTATACACGGGCCATAACTCCTACTTAACAGGTAATCAATTTAGTAGTAATAGCAGTACTGCCCCAATTATAAAGGCACTCAAGAAAGGTGTTAGAGTCATCGAACTTGATTTGTGGCCTAACTCCACTGGTAAATCTGTTGAAGTTCGTCATGGAGGGACTATAACTAGTCCGGTGAAACTGAGAGCTTGTTTGAAAGCAATTAAAGAATATGCATTTTATGCTTCTAAGTATCCTGTTGTTATAACTTTTGAAGACCATATAAAACCACCTCTCCAAGCTAAAGTTGCCAAGATGGTGAATGGCATATTTGGGGACATGCTGTATCGCCCTTCTTCAGAACACATTATGAATAAGTTCCCATCTCCAGAATCATTGAAGGAAAAGATTCTAATTTCAACCAAACCACCAGAAACTCCTGAAGAAGATCAAGAGCACAACGAAGAAAGATCATCTGAAATCAACTACTATATGATACGATATAATTCAGATGACAATGATGAAAATGAAGATGAAGACAAAGACAAAAGTGAGGATGAAGAGAATAATGCTCTAGAATATAGGGATATAATCTCAATTCATGCGGGGAAACCAAAAGGTGGGTCAGGGAACTTGTTCATTAGTCATGAAAAAGTAAGGCGTCTAAGCTTGAGCGAGGACCAGCTTGAGGAAATTGCTAAAACAAGGGCAACAGAAATTGTCAGATTCACCCAAAAGAATCTGCTTAGGATATATCCAAGGGGCACGCGTGTGGACTCATCTAATTACAATCCCATGGTTGGATGGATGCATGGAGCTCAGATGGTAGCCTTTAATATGCAGGGACATGGGCACTTGCTTAGGATGATGGAAGGAATGTTCAGAGCAAATGGTGGGTGTGGCTATGTCAAGAAACCAAATATCTTGTTGGATGAGAACGAGGTCTTTGATCCTAGTGCATTTAGACTACCTAAAAAACATCTGCAGGTTATGGTGTACATGGGTGAAGGTTGGCGTTCAGAATTTTCCCCAACACACTTTGATTTATATTCTCCTCCTGACTTCTGTGTAGAGCTTCGTATCTATGGTGTCCCAGCAGATGAAAGTACAAAAGAAACAATGACAATGGAAGATGAGTGGGTACCTGTATGGAACCAAGAATTTATCTTCCCATTAACGGTTCCGGAATTGGCACTCTTATACATCAAAGTGGTCGAACATGACTTCAAAGGAAAAAATGATTTTGCAGGAGAAACATGTTTGCCTGTTTCTGAGTTAAGACAAGGCATTCGTTCGATTCGTTTGTGTAACAAAAAAGGTGAACCTTATAAGCATGTAAGGCTTCTTATGCGATTCCAATTTATATAA 1749 0.4042 MGSSGASLGSSSWRKPKHQQHFQVCFCFKRIFKLKVSEPPEEIRSIFEKFSENNNGTVMSVDGLYRFLVRFQGERDCDDTKHKAQAIFDSHKHLFLFQRKGFHLDAFFRYLLGDDNAPLLQVGHDMRSPLAHYFLYTGHNSYLTGNQFSSNSSTAPIIKALKKGVRVIELDLWPNSTGKSVEVRHGGTITSPVKLRACLKAIKEYAFYASKYPVVITFEDHIKPPLQAKVAKMVNGIFGDMLYRPSSEHIMNKFPSPESLKEKILISTKPPETPEEDQEHNEERSSEINYYMIRYNSDDNDENEDEDKDKSEDEENNALEYRDIISIHAGKPKGGSGNLFISHEKVRRLSLSEDQLEEIAKTRATEIVRFTQKNLLRIYPRGTRVDSSNYNPMVGWMHGAQMVAFNMQGHGHLLRMMEGMFRANGGCGYVKKPNILLDENEVFDPSAFRLPKKHLQVMVYMGEGWRSEFSPTHFDLYSPPDFCVELRIYGVPADESTKETMTMEDEWVPVWNQEFIFPLTVPELALLYIKVVEHDFKGKNDFAGETCLPVSELRQGIRSIRLCNKKGEPYKHVRLLMRFQFI* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1497 582 Gene3D C2 domain 449 582 IPR035892 -
Ahy17g1497 582 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 19 581 - -
Ahy17g1497 582 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 455 581 IPR035892 -
Ahy17g1497 582 SUPERFAMILY PLC-like phosphodiesterases 124 438 IPR017946 GO:0006629|GO:0008081
Ahy17g1497 582 MobiDBLite consensus disorder prediction 295 316 - -
Ahy17g1497 582 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 350 436 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy17g1497 582 PRINTS Phospholipase C signature 396 414 IPR001192 GO:0035556
Ahy17g1497 582 PRINTS Phospholipase C signature 548 558 IPR001192 GO:0035556
Ahy17g1497 582 PRINTS Phospholipase C signature 129 147 IPR001192 GO:0035556
Ahy17g1497 582 PRINTS Phospholipase C signature 253 270 IPR001192 GO:0035556
Ahy17g1497 582 PRINTS Phospholipase C signature 375 396 IPR001192 GO:0035556
Ahy17g1497 582 PRINTS Phospholipase C signature 155 175 IPR001192 GO:0035556
Ahy17g1497 582 SMART C2_3c 454 562 IPR000008 -
Ahy17g1497 582 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 19 581 IPR001192 GO:0035556
Ahy17g1497 582 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 124 269 - -
Ahy17g1497 582 Gene3D Phosphatidylinositol (PI) phosphodiesterase 121 448 IPR017946 GO:0006629|GO:0008081
Ahy17g1497 582 MobiDBLite consensus disorder prediction 299 313 - -
Ahy17g1497 582 Pfam C2 domain 455 556 IPR000008 -
Ahy17g1497 582 CDD C2_PLC_like 452 581 - -
Ahy17g1497 582 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 349 434 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy17g1497 582 SMART plcy_3 321 437 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy17g1497 582 Pfam Phosphatidylinositol-specific phospholipase C, X domain 126 269 IPR000909 -
Ahy17g1497 582 SUPERFAMILY EF-hand 28 120 IPR011992 -
Ahy17g1497 582 ProSiteProfiles C2 domain profile. 429 564 IPR000008 -
Ahy17g1497 582 Gene3D - 38 120 - -
Ahy17g1497 582 SMART plcx_3 124 269 IPR000909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1497 Ahy-Chr17 28588629 28594119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1497 19 579 EF-hand Containing Proteins AT5G58670 54.306 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1497 K05857 - gmx:100817915 754.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1497 17 28588629 28594119 Ahy17g1497 17 28588629 28594119 ECH
Ahy17g1497 17 28588629 28594119 Ahy20g1408 20 34330370 34337900 ECH