Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1281 ATGTGGAGTAGAGGGTGGTGTGTAGGGTCATTGTTGAGGCAAAGGGTATGTGCTACTTTAAATATTGGAAGTAGCCATGGCTATGGTGGAAAGGCTCATCAACCTTTTGATCACACTCCATTGTTCGGTTTGAAAGGTTTTGCTGATGATGGAAGAAAGAGGAATAATAATGGAGAAGGAGGAAGAGGTGTTGGTGTTGGTTCTATATCTGTTTTTCTGAACCGAATGAATAATAAGAGGGGTGTGTGTTCATCAACTTGGGTTTCATCTCCTTTTAACAATGGGGGCATTAATAATTCAAATTCTCCATCTTCTTCTTATGGGAAAATAGAAGGGACAAATAGTTTATCATACGCTGAGGCGAAGAAGTTAATGAGGCTAGTGAATGTGGAGAATCTAAAGCTGAAGCTTGGAAGTGATGGGAAGGAAGTTATTCCGTACAATGAACTTATTGAAGCATGTGAAAGCATGGGAGTTGTAAGGAATAAAGAAGAGGCTATGGCGTTTGCTAAGGTTCTTGATGAAGCTGGTGTTATTCTTCTCTTTAGGAACAAGGTCTATCTGCACCCTGATAAGGTGGTTGATCTGGTTATAAGTGCAGTTCCACTAGCATTAACTTCTGAGAATGATCCTAGAAGGGAAGAACTAAAGAGGCTTCAAGAGAAGAAAGAAGAGCTCGATGTCTTGGCGCACAAGCAAGTCCGGCGCATCCTCTGGGGCGGCCTAGGATTCGGCATAGCCACCGTCTCCCTCTTCTTCCGGCTAACATTCTGGGAATTCTCATGGGACGTCATGGAGCCGATCGCATTCTTCACCACGTCGACCGGCCTAATCATCGGCTATGCCTACTTCCTATTCACCTCAAGGGACCCTACTTACCAAGACTTCATGAAGAGGCTATTCCTTTCAAGGCAGAGGAAGCTTCATAAGAGGCACAATTTTGATATTGACAAGTATAATGATCTTAGGTGCAAATGCAAAACACCTTTAGATGCAAAAACCACACTCAAGAATCGTTTAGGCGTGGATCTAGATCTGGAGGAGGCTTAA 1050 0.4333 MWSRGWCVGSLLRQRVCATLNIGSSHGYGGKAHQPFDHTPLFGLKGFADDGRKRNNNGEGGRGVGVGSISVFLNRMNNKRGVCSSTWVSSPFNNGGINNSNSPSSSYGKIEGTNSLSYAEAKKLMRLVNVENLKLKLGSDGKEVIPYNELIEACESMGVVRNKEEAMAFAKVLDEAGVILLFRNKVYLHPDKVVDLVISAVPLALTSENDPRREELKRLQEKKEELDVLAHKQVRRILWGGLGFGIATVSLFFRLTFWEFSWDVMEPIAFFTTSTGLIIGYAYFLFTSRDPTYQDFMKRLFLSRQRKLHKRHNFDIDKYNDLRCKCKTPLDAKTTLKNRLGVDLDLEEA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1281 349 Pfam Mitochondrial calcium uniporter 164 322 IPR006769 -
Ahy17g1281 349 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 109 328 IPR039055 GO:0051560
Ahy17g1281 349 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 109 328 - -
Ahy17g1281 349 Coils Coil 212 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1281 Ahy-Chr17 19938838 19942540 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1281 K20858 - gmx:100788407 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1281 17 19938838 19942540 Ahy17g1281 17 19938838 19942540 ECH
Ahy17g1281 17 19938838 19942540 Ahy7g1053 7 15802401 15805335 hybridization
Ahy17g1281 17 19938838 19942540 Ahy17g1281 17 19938838 19942540 PCT
Ahy17g1281 17 19938838 19942540 Ahy7g1053 7 15802401 15805335 PCT
Ahy7g1053 7 15802401 15805335 Ahy17g1281 17 19938838 19942540 PCT