Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1272 ATGGTGTGGGGACTCTTCCCCAATGATCCTCTTTCTGGTGAAGATAAGTACTACATTTTCAAAACTGGAACTTATAAAGTTGGTCGAAAAGGTTGTGATGTAATCATCACTAAAGATAAAGGGGTTTCTCGGGTTCATGCAGAAATAATTGTTAATGGGATGAACCTGTTAAACTCTTTACCAAATGAACGTTCTCGTATGTCACCAAATGTACAGATCAAAGATTGCTCCAAATATGGGACATTTATTAGCAAGAATAATGGACACAGGATGAAAGTTCATGAGCTTCCAAACAAAGAAATAGCTTTGGACAATGGCGATCTTGTCTCATTTGGTACTGGTAGTGCTACCTACAAGTTTTGCCATGTCCCACTTATGTTTTTCATTTGTTCCTTGGACAAAGTAGATCAATCTATTGAAGAGAAAATTTCGTCAATTGGTGCTGCTAGTACTTGTACCTTAAGTGAAGATTGCACACACGTTCTGGTGGATCAACTCATGCCATTGAAAAAGGATATTGTTGATGCTGTTGTAGCAAAAAAACATTGTGTTCTCAAAACATGGCTTGAGGATTTTGCAGAAAAGAATATTGTCACTGATATGCCTAGCTGTTATTCATATATACCAACGGTGTCAGTGGAAGGAATATCTATCAAAGTTGCTGACCCTAAAACTCGTGAAAATTGCTTGAAAGGATACACGTTTTTGTTAGAATCTGTGCATATGTACAAATTCAGGGATCAGCTCAAATCTTTGTTGGATGTCACTGGTGCAAAAACTGTCTCCTATGAATATTTTTGTTCAAATAGTCAGGGTTCAGATTATGGAGACGATAATCGTTTGGTTTGTGTCATCCCAGGGGTACCAGCATGCAAATCTGATCGCTTCAATAAATTAAGTTCTTTGCTTAGAGTGAATGAGATGGATGTAATATTTGCTGCTTTAAGTGGACATCTTGATCCATCGATACTGAAGTCACCATGCATACTTGTTTCATCTTCATGCTCCACAGACGAGACAGTGGTAGCAGATTCAGATACTGAAGTTGAAACAGCCACATCAGCCCATGCAACTGAGACATTCCTCAACGGAAATACCATACAATATGTTAAAACTGAAGCATTGGATGATGATTCTGGCAGTATGGATAATAAAAAACATGAGAAAATGGAACCATCCGCAGTTGATGTTTCTACCAGATCAACTGACATAAAACAAGCAAAAACAGCGTCACCCTTGGATGATTGTTCTGCCAAATTGGAAACTCATGCTATGAGCTTCAGAGATGGTAGTGGTAGTATAAAAGTGAAGAAAGACAAGGTTGATGATTATGGAAGTGGAACTGCAGATATTATTTATAGTCAAGATTTAGTTGTCCGAGATGTAAACAGAGTAACTAACATGAGTACTGCACAAAACAGCAGCGTTCCAAATTTTAAACATTTTAGAAAGACACATACTCAATCTGGTAATAGTTTCGAAAGTCTTGTTCCGTTTGCAAAATATCCATACAAGGACTCTGATTTTGGGAATGATGAGGTACATGAGTCTGTGAAAGAGGAAAAACGGCGGAAGAAAATGGAAGCTGTGGCTGAAGACCTTTTTAATAATGAGAAGGCAAGAAAGCGAGGCACAGCTGGTTCACTTCGTGGGATCCTTATTTCGTGA 1668 0.3825 MVWGLFPNDPLSGEDKYYIFKTGTYKVGRKGCDVIITKDKGVSRVHAEIIVNGMNLLNSLPNERSRMSPNVQIKDCSKYGTFISKNNGHRMKVHELPNKEIALDNGDLVSFGTGSATYKFCHVPLMFFICSLDKVDQSIEEKISSIGAASTCTLSEDCTHVLVDQLMPLKKDIVDAVVAKKHCVLKTWLEDFAEKNIVTDMPSCYSYIPTVSVEGISIKVADPKTRENCLKGYTFLLESVHMYKFRDQLKSLLDVTGAKTVSYEYFCSNSQGSDYGDDNRLVCVIPGVPACKSDRFNKLSSLLRVNEMDVIFAALSGHLDPSILKSPCILVSSSCSTDETVVADSDTEVETATSAHATETFLNGNTIQYVKTEALDDDSGSMDNKKHEKMEPSAVDVSTRSTDIKQAKTASPLDDCSAKLETHAMSFRDGSGSIKVKKDKVDDYGSGTADIIYSQDLVVRDVNRVTNMSTAQNSSVPNFKHFRKTHTQSGNSFESLVPFAKYPYKDSDFGNDEVHESVKEEKRRKKMEAVAEDLFNNEKARKRGTAGSLRGILIS* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1272 555 Pfam FHA domain 25 112 IPR000253 GO:0005515
Ahy17g1272 555 SMART FHA_2 24 91 IPR000253 GO:0005515
Ahy17g1272 555 PANTHER NIBRIN-RELATED 2 539 IPR040227 GO:0006302|GO:0007095|GO:0030870
Ahy17g1272 555 CDD BRCT 127 191 - -
Ahy17g1272 555 Gene3D - 7 120 - -
Ahy17g1272 555 Gene3D BRCT domain 121 203 IPR036420 -
Ahy17g1272 555 ProSiteProfiles Forkhead-associated (FHA) domain profile. 25 84 IPR000253 GO:0005515
Ahy17g1272 555 CDD FHA 2 120 IPR000253 GO:0005515
Ahy17g1272 555 SUPERFAMILY BRCT domain 125 200 IPR036420 -
Ahy17g1272 555 SUPERFAMILY SMAD/FHA domain 16 122 IPR008984 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1272 Ahy-Chr17 19769542 19775338 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1272 K10867 - gmx:100783205 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1272 17 19769542 19775338 Ahy17g1272 17 19769542 19775338 ECH
Ahy17g1272 17 19769542 19775338 Ahy7g1041 7 15644855 15650676 hybridization