Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1004 ATGGGTTTGTGGACATTACTTGAGGGGTTCCTGCTTCTTGCAAATGCACTAGCGATATTAAATGAGGACCGATTTCTGGCACCTAGAGGATGGGGCTTATCTGATTTTTCAAGTGGCAGGACAAAATCTTTCAAAGGCCAGCTCATAGGTCTTATTTACGCAACTCAGTACCTAAGAGTTCCTCTCATACTTCTCAATTCCATCTGCATCATTTTGAAATTTGTTTCTGGATAA 234 0.4103 MGLWTLLEGFLLLANALAILNEDRFLAPRGWGLSDFSSGRTKSFKGQLIGLIYATQYLRVPLILLNSICIILKFVSG* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1004 77 PANTHER YOS1-LIKE PROTEIN 1 77 - -
Ahy17g1004 77 Pfam Yos1-like 3 77 IPR013880 -
Ahy17g1004 77 PANTHER UNCHARACTERIZED 1 77 IPR013880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1004 Ahy-Chr17 12606328 12608563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1004 K22939 - gmx:100777404 132.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1004 17 12606328 12608563 Ahy7g0827 7 10521140 10523374 hybridization
Ahy20g1481 20 41551232 41553250 Ahy17g1004 17 12606328 12608563 PCT
Ahy17g1004 17 12606328 12608563 Ahy20g1481 20 41551232 41553250 PCT