Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0933 ATGGGTTTTTCAAAAGAAGAGAAATCAAAGAGGGTATTGAGGGTTGTGAAGACACTTTTCTTTTTAATCACAATGATTATGTCATTGCTTCTCATCTCTGCTCCCACCATTCTTGTTATTGCCGATGCTCTGCTTCCCTCTGCTCTTCTCTCTGTTTTTTCTTCTTCGTCATTGTTGTCGCCACCATCATCTATCAAAACAGCTCTGTTTTCTCATCTTCAGAATTACGACTTTCGATACTCCCTCGTCGATATCCCCCTCTTATCCATCGCTCGATCTCTCGTTATCTTCTGTGTTTATAGCTTATGTGATGGGCCAAGGCTTTCAAATGGTCCATATTTGGGTGTAACAACGGTGTGTTCGGTGTTTTCTTTGATGTTTGTGTCATTGAAAGCTGTTTACATCTTTGGGAATGGAACAACAGCAGCAACAAAAGAGTATTATGTTAGAAGCTCCGAAATAGCTTTATTTGTGTGTTCTTATGTTTTTGCTGTGGGACATGTTGTTGTTGCATACAGAACAAGTTGCAGAGAGAGAAGGAAGCTTTTGGTCTACAAAATTGACATTGAAGCTGGTATTATCATCCAGAAAATTCCAATAGTGACCTTGACACGGAGCACTGAATAG 627 0.3987 MGFSKEEKSKRVLRVVKTLFFLITMIMSLLLISAPTILVIADALLPSALLSVFSSSSLLSPPSSIKTALFSHLQNYDFRYSLVDIPLLSIARSLVIFCVYSLCDGPRLSNGPYLGVTTVCSVFSLMFVSLKAVYIFGNGTTAATKEYYVRSSEIALFVCSYVFAVGHVVVAYRTSCRERRKLLVYKIDIEAGIIIQKIPIVTLTRSTE* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0933 208 Pfam Cholesterol-capturing domain 63 136 IPR019498 -
Ahy17g0933 208 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 192 - -
Ahy17g0933 208 PANTHER ALPHA/BETA HYDROLASE RELATED PROTEIN 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0933 Ahy-Chr17 11359305 11362696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0933 2 191 Miscellaneous Gene Families AT1G80280 42.211 1.64e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0933 - - aprc:113847878 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0933 17 11359305 11362696 Ahy17g0933 17 11359305 11362696 ECH
Ahy17g0933 17 11359305 11362696 Ahy7g0753 7 9119065 9122560 hybridization
Ahy20g1425 20 35307699 35312160 Ahy17g0933 17 11359305 11362696 PCT
Ahy10g1054 10 24449922 24454152 Ahy17g0933 17 11359305 11362696 PCT
Ahy17g0933 17 11359305 11362696 Ahy20g1425 20 35307699 35312160 PCT
Ahy17g0933 17 11359305 11362696 Ahy10g1054 10 24449922 24454152 PCT