Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0930 ATGTCCGCCGGCCAGCTTCGCGAATTCGTGGACAAGGTTCAGTGCCAACCGCAATACACCGTCGAGGAGTGTGAGCGGATCATGGAGACCTTCTTGAGATCGCGAAGGGACGAAAGTGATAATGATGAGAACAACAAGAAGAAGAAAAAGGGCGGCGACGGCGACGGTAATGACAATGGTGGTTGTTGTTTCACCCTCGAAGAATTCTTCCAGTTCTTGTATTTTGATGAATTCAATGCTCCTCTCTCTCCTGAGGTACATCATGACATGGATGCTCCATTATCACATTATTTCATAAACACAGGGCACAATTCATATCTCACTGGGAATCAACTAAGCAGCGATTGCAGTGAGGTGCCAATCATACAAGCCTTGAATAAAGGTGTTCGAGTTATTGAACTTGACTTATGGCCCAATTCAAATAAAACTGATATTGATGTAGTTCATGGAAGGACACTTACTGCTCCTGTGTCACTATACAAATGTTTAGTGGCCATAAAAGATAATGCTTTTGTTGCTTCTGAATACCCAGTCATTATAACTTTAGAAGACCACCTTACAAAAGATCTTCAAGCTCTAGCTGCAGAGGTAACAAATGAAATATTTGGAGATTTGTTATACTACCCTCCAGAAGATGCAATGGATGAATTCCCATCACCAGAATCATTAAAAGGGAGAATCCTAATATCAACAAAACCACCTCCAGTTGATGAACTAAGAGATACCTTTTCCAAGCGTTTGATAAAGGATGGTAAGGAATCTGAAAGAGAATCTGCTGATGAAGCTCTATCACCCCCTCCAAGCATTGGTTCTGATGTGGACGCTTGTGATAGGTACAATGCAAGTAGTGATCGTGAATGTGAAGAAGAATTGACGCCTTCAAGTGAGATACATAGTGGAGTAATTCATTACAAAAGAATGATTACAATCCATGCTGGAAAACCCAAGGGTCATATAAAAGATTCCTTATCAGTTGATGGCAAAGTTAAGCGTTTAAGTTTGAGCGAACAGGAAATTGAAAGGGCTTCATCTTCTTATGGAGATGATCTTATTAGTTTTACACAGAGGAATATTCTGAGGGTGTATCCTAAGGGGACACGTGTCAACTCCTCAAATTTCCGGCCACATATAGGGTGGTTGTATGGAGCACAAATGGTTGCAATGAACATGCAGGGGTATGGAAAATCTCTATGGCACGCACAAGGTTTGTTTAGAGCAAATGGAGGGAGTGGTTATGTGAAAAAACCTCCACTCCTAATGAACAAAAATGATGATGGCCAATCTAATATTTTTAATCCCAAAACACCATATCCCACCTCCAGAATTATGAAGGTGAAAATATATATGGGAACAGGGTGGATTTCTAATTTCAGCAAAACACACTTTGATACGTTCTCTCCACCAGACTTTTACATAAAGGTGTCTATACATGGTGTACAATATGACAAAGCTAGGCACAGAACAAGGGTGATTTCAGATAATTGGTTTCCAGTTTGGGAAGAAGAATTTGAAATCCCATTGAAAGTTCCAAGTCTTGCATTGGTTCTGATAGAGGCAAGAGAGTATGATAAGCATGAAAAGGATGATTTTGGAGGCCAAACATGTTTCCCTGTCGATGAAATAAGACCGGGCTTCCGTTCAGTCCCTTTATATGATGAAAAGGGCAATAAATATAGCCATGTAAAGCTTTTATTGCGCTTTCAATTTCAACATATTTAG 1719 0.402 MSAGQLREFVDKVQCQPQYTVEECERIMETFLRSRRDESDNDENNKKKKKGGDGDGNDNGGCCFTLEEFFQFLYFDEFNAPLSPEVHHDMDAPLSHYFINTGHNSYLTGNQLSSDCSEVPIIQALNKGVRVIELDLWPNSNKTDIDVVHGRTLTAPVSLYKCLVAIKDNAFVASEYPVIITLEDHLTKDLQALAAEVTNEIFGDLLYYPPEDAMDEFPSPESLKGRILISTKPPPVDELRDTFSKRLIKDGKESERESADEALSPPPSIGSDVDACDRYNASSDRECEEELTPSSEIHSGVIHYKRMITIHAGKPKGHIKDSLSVDGKVKRLSLSEQEIERASSSYGDDLISFTQRNILRVYPKGTRVNSSNFRPHIGWLYGAQMVAMNMQGYGKSLWHAQGLFRANGGSGYVKKPPLLMNKNDDGQSNIFNPKTPYPTSRIMKVKIYMGTGWISNFSKTHFDTFSPPDFYIKVSIHGVQYDKARHRTRVISDNWFPVWEEEFEIPLKVPSLALVLIEAREYDKHEKDDFGGQTCFPVDEIRPGFRSVPLYDEKGNKYSHVKLLLRFQFQHI* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0930 572 SMART plcy_3 304 420 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy17g0930 572 CDD C2_PLC_like 441 570 - -
Ahy17g0930 572 Gene3D Phosphatidylinositol (PI) phosphodiesterase 85 430 IPR017946 GO:0006629|GO:0008081
Ahy17g0930 572 Pfam Phosphatidylinositol-specific phospholipase C, X domain 90 232 IPR000909 -
Ahy17g0930 572 PRINTS Phospholipase C signature 358 379 IPR001192 GO:0035556
Ahy17g0930 572 PRINTS Phospholipase C signature 119 139 IPR001192 GO:0035556
Ahy17g0930 572 PRINTS Phospholipase C signature 536 546 IPR001192 GO:0035556
Ahy17g0930 572 PRINTS Phospholipase C signature 216 233 IPR001192 GO:0035556
Ahy17g0930 572 PRINTS Phospholipase C signature 93 111 IPR001192 GO:0035556
Ahy17g0930 572 PRINTS Phospholipase C signature 379 397 IPR001192 GO:0035556
Ahy17g0930 572 ProSiteProfiles C2 domain profile. 424 552 IPR000008 -
Ahy17g0930 572 SMART C2_3c 442 550 IPR000008 -
Ahy17g0930 572 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 331 417 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy17g0930 572 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 570 IPR001192 GO:0035556
Ahy17g0930 572 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 88 232 - -
Ahy17g0930 572 MobiDBLite consensus disorder prediction 249 274 - -
Ahy17g0930 572 Gene3D C2 domain 438 572 IPR035892 -
Ahy17g0930 572 MobiDBLite consensus disorder prediction 34 54 - -
Ahy17g0930 572 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 333 419 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ahy17g0930 572 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 442 569 IPR035892 -
Ahy17g0930 572 SUPERFAMILY PLC-like phosphodiesterases 88 421 IPR017946 GO:0006629|GO:0008081
Ahy17g0930 572 SMART plcx_3 88 232 IPR000909 -
Ahy17g0930 572 Pfam C2 domain 444 543 IPR000008 -
Ahy17g0930 572 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 6 1 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0930 Ahy-Chr17 11286071 11292850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0930 1 570 Acyl Lipid Metabolism Gene Families AT2G40116 54.419 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0930 K05857 - gmx:547863 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0930 17 11286071 11292850 Ahy7g0750 7 9051525 9055607 hybridization
Ahy20g1408 20 34330370 34337900 Ahy17g0930 17 11286071 11292850 PCT
Ahy10g1039 10 23736904 23743261 Ahy17g0930 17 11286071 11292850 PCT
Ahy17g0930 17 11286071 11292850 Ahy20g1408 20 34330370 34337900 PCT
Ahy17g0930 17 11286071 11292850 Ahy10g1039 10 23736904 23743261 PCT