Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0869 ATGAAGCCACCATTCTCACCACCTCCTTCTTCTTCCTCTCTTCTGAGTCTGAGAGGCAAGGGTCGCCTCTCTCCCTACCTCTTCACACTCTTTCTTTTCATCCTCTTCGTTGCCGTCCTCTATGGCGAAGATTTCATGTGTATCTTTGGTGAACAACTCCAACTTTATTCCACCGCGGACACATTTTTCGCTTCTTCTTCCTCCTCTTCTTCTTCCTCGTCGCAGAGGGTGAAGAGGGAGCGGAAACTGCCATTTGCGGTGGGAAAGACGGAGGAAGGATGCGACGTGTTCAGCGGACGGTGGGTGAGGGACGAGATGAGGCCGTTGTACGAGGAAGCGGACTGTCCGTACATACAGCCTCAGCTGACGTGTCAGGAGCACGGTCGACCCGACACCGGCTACCGGCAATGGAGGTGGCAACCTCACGGTTGCGATCTACCCAAATTCAACGCGAGCATGATGCTTGAGACACTTCGAGGGAAGAGGATGATGTTTGTGGGAGACTCCCTGAATCGTGGTCAATTTGTTTCTTTTGTTTGCCTTCTCCATCACCTCATTCCTCCTCATCAAAAGTCCATGCAAACCTTTGATCATGATTCACTCACTGTATTCACAGCCAAGGAATATAATGCGACAATTGAGTTCTATTGGGCACCATTTCTTCTTGAATCAAACTCAGACAACGCAGTGGTTCATAGGATATCAGATAGGGTAGTGAGAAAGGGTTCAATCAACAAGCATGGTCAACATTGGAAAAACGTTGACATTATGGTGTTCAACACTTATCTTTGGTGGATGACTGGCTTGAAGATGAAGATCTTGCTTGGATCTTTTGATGATGAAGTGAAAGAGATAGTGGAGGTATCAACAGAAGATGCTTATCGTATGGGTATGAAAAGCATGCTTAGATGGGTGAAGTTGAATATGGACCCCAAGAAAACTAGAGTCTTCTTCACCAGCATGTCACCTTCTCATCAAAAAAGTATAGATTGGGGAGGTGAAGCAGGAAAGAATTGCTATAATGAAACAAGTATGATTGAAGATCCAAATTATTGGGGCTCAGATTCTAGGAAGAGCATAATGCAAGTGATTGGAGAAGTGTTCAAAAAATCCAAAGTTCCCATAACATTACTTAACATCACACAGCTATCTAGTTACAGAAAAGATGCACATACTTCAATATACAAGAAGCAATGGAGCCCCTTGACACCAGAACAATTAGCAAACCCTGTTAGCTATGCTGATTGTGTTCATTGGTGTTTGCCTGGCCTTCAAGACACTTGGAATGAGCTTTTGTTTGCAAAGTTATTCTATCCTTAA 1320 0.447 MKPPFSPPPSSSSLLSLRGKGRLSPYLFTLFLFILFVAVLYGEDFMCIFGEQLQLYSTADTFFASSSSSSSSSSQRVKRERKLPFAVGKTEEGCDVFSGRWVRDEMRPLYEEADCPYIQPQLTCQEHGRPDTGYRQWRWQPHGCDLPKFNASMMLETLRGKRMMFVGDSLNRGQFVSFVCLLHHLIPPHQKSMQTFDHDSLTVFTAKEYNATIEFYWAPFLLESNSDNAVVHRISDRVVRKGSINKHGQHWKNVDIMVFNTYLWWMTGLKMKILLGSFDDEVKEIVEVSTEDAYRMGMKSMLRWVKLNMDPKKTRVFFTSMSPSHQKSIDWGGEAGKNCYNETSMIEDPNYWGSDSRKSIMQVIGEVFKKSKVPITLLNITQLSSYRKDAHTSIYKKQWSPLTPEQLANPVSYADCVHWCLPGLQDTWNELLFAKLFYP* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0869 439 Pfam PMR5 N terminal Domain 93 145 IPR025846 -
Ahy17g0869 439 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 13 439 IPR029962 GO:0016413
Ahy17g0869 439 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 146 434 IPR026057 GO:0016740
Ahy17g0869 439 PANTHER PMR5 DOMAIN, PC-ESTERASE, PROTEIN TRICHOME BIREFRINGENCE-LIKE 32/46-RELATED 13 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0869 Ahy-Chr17 10049973 10053894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0869 - - gmx:100785571 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0869 17 10049973 10053894 Ahy17g0869 17 10049973 10053894 ECH
Ahy17g0869 17 10049973 10053894 Ahy7g0696 7 7924295 7928444 hybridization
Ahy20g1331 20 27895096 27902180 Ahy17g0869 17 10049973 10053894 PCT
Ahy17g0869 17 10049973 10053894 Ahy20g1331 20 27895096 27902180 PCT