Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0852 ATGCAATGTTCCTTATTTCTATATAAATCTTTTTGTTCAATCTCACAATCTGTTCAATACATTAAAAACAAACTTGCTCCTTTATTGAAGGCCTTTGCAGAAGAAAAGAAACATTTGTTACTAATTTTCTCCTCAGAAGTCAGAATGACCAATTTGGTAGAAGTAAAGGTTGGTTTGCACTGTGATGAATGTATCAAGAAAATTCTCAAGGCCATCAAGAAGATTGAAGATATTGAAACTTATAATGTGGACAAGCAGCTAAACAAGGTCATTGTTACCGGTAATGTGACTACAGAAGAAGTGATTAGAGTTCTTCAAAAGAATGGCAAGAATGCAACACCTTGGGAACAAGATCTTCAACCTCAACCCAATTGCTGA 378 0.3466 MQCSLFLYKSFCSISQSVQYIKNKLAPLLKAFAEEKKHLLLIFSSEVRMTNLVEVKVGLHCDECIKKILKAIKKIEDIETYNVDKQLNKVIVTGNVTTEEVIRVLQKNGKNATPWEQDLQPQPNC* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0852 125 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 50 117 IPR045181 GO:0046872
Ahy17g0852 125 PANTHER HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN 50 117 - -
Ahy17g0852 125 Pfam Heavy-metal-associated domain 55 110 IPR006121 GO:0046872
Ahy17g0852 125 SUPERFAMILY HMA, heavy metal-associated domain 50 117 IPR036163 GO:0046872
Ahy17g0852 125 Gene3D - 49 114 - -
Ahy17g0852 125 ProSiteProfiles Heavy-metal-associated domain profile. 58 114 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0852 Ahy-Chr17 9823487 9824658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0852 - - adu:107496942 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0852 17 9823487 9824658 Ahy7g0679 7 7710614 7711613 hybridization
Ahy20g1303 20 26621764 26623092 Ahy17g0852 17 9823487 9824658 PCT
Ahy17g0852 17 9823487 9824658 Ahy20g1303 20 26621764 26623092 PCT