Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0408 ATGGAAAATAGTGGTGGTGGTGCCCTTTTGAGGAATAGAAGGTTGGAGAGCTTCTTAGATACAAGCTCTGGTCTAAGAGTGGAAGAAGCTCCAAAAATTTTGGTTAAAGAAAGACCGGAACACCGGCTTAAGAAGGATGTATATATCAATGACAACGGGTGGGTTTCGTCAATCATTTCCTGGATCAGGATTGTGACATGTTTTGTGTCTATGATGGTCACAACATTCATATGGGCATTGATCATGGTTGTGCTTATACCATGGCCTTATGAGAGGATTCGGCAAGGCAATATTTATGGCCATGTCACTGGTAGAATGCTGATGTGGATTCTTGGTAATCCTATAAAGATTGAAGGTGCTGAGTACAATAACGAAAGGGCGATTTATATCAGTAACCATGCATCTCCAATTGACATTTTTCTTATAATGTGGTTGACTCCTACAGGCACTGTTGGTATTGCCAAGAAAGAGATAGTATGGTATCCTCTATTTGGGCAACTTTATGTTTTGGCCAATCATCTTCGAATAGACCGATCCAATCCAACCTCAGCTATTGAGTCCATGAATGAGGCAGCTCGTGCAGTTGTAAGAAACAATCTGTCCCTGATAATCTTTCCGGAGGGTACCAGGTCGAAGAATGGACGACTACTTCCTTTCAAAAAAGGTTTTGTCCATTTGGCCCTACAAACGCGCCTTCCTATTGTTCCGATGGTCCTCACCGGTACTCATCAGGCATGGAGGAAAGGCAGTTTACATGTCCGACCGACACCTCTTGCCGTCAAGTATCTTCCTCCGATAAGCACCGAAAATTGGAAGGCCGAGAAGATCGATGACTATGTCAAAATGGTTCATGACTTGTATGCTGCACAACTTCCTGAGACTCAGAGGCCTTTGTCCTAA 900 0.4344 MENSGGGALLRNRRLESFLDTSSGLRVEEAPKILVKERPEHRLKKDVYINDNGWVSSIISWIRIVTCFVSMMVTTFIWALIMVVLIPWPYERIRQGNIYGHVTGRMLMWILGNPIKIEGAEYNNERAIYISNHASPIDIFLIMWLTPTGTVGIAKKEIVWYPLFGQLYVLANHLRIDRSNPTSAIESMNEAARAVVRNNLSLIIFPEGTRSKNGRLLPFKKGFVHLALQTRLPIVPMVLTGTHQAWRKGSLHVRPTPLAVKYLPPISTENWKAEKIDDYVKMVHDLYAAQLPETQRPLS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0408 299 Pfam Acyltransferase 116 239 IPR002123 GO:0016746
Ahy17g0408 299 TIGRFAM AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 124 239 IPR004552 GO:0003841|GO:0008654|GO:0016020
Ahy17g0408 299 CDD LPLAT_AGPAT-like 105 277 - -
Ahy17g0408 299 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 45 295 - -
Ahy17g0408 299 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 29 294 - -
Ahy17g0408 299 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE ALPHA 45 295 - -
Ahy17g0408 299 SMART plsc_2 127 242 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0408 Ahy-Chr17 3978553 3982212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0408 64 250 Acyl Lipid Metabolism Gene Families AT4G30580 30.964 1.95e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0408 K13509 - pvu:PHAVU_006G042300g 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0408 17 3978553 3982212 Ahy17g0408 17 3978553 3982212 ECH
Ahy17g0408 17 3978553 3982212 Ahy7g0280 7 2237111 2240545 hybridization