Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0402 ATGGCTTCGTGGTGTGCTTCGAGGTGCTTCCAGATTCCGGCGATGGACGTCGCCGCACTCCGCAACCGCGCCTCCATCGCCGCCGCCGCCGGCGTAGGGTGCGCTTCCATTGCCGGCACCTCATTCCTCCGCTCATCAAAATCAAAGCGCGCTTTGCCATTCACCTGCTTAAGCATCTCAACTGATGCCAGTTTAAAGGAAGCTGTTAAAACTGAGAAGGCTCCAGCTGCATTGGGACCGTATTCTCAAGCAATCAAATCCAACAACCTTCTCTTTGTTTCAGGTGTTCTTGGCCTTGTTCCTGAGACAGGGAAGTTTGTCTCTGATAATGTTGAAGATCAGACAGAGCAGATCCTTAAAAATATGGGGGAAATCCTTAAAGCCGGTGGTGCCAATTACTCATCGGTTGTTAAGACCACAATCATGTTGGCTGACTTGAAGGACTTTAAGAAAGTCAACGAGATCTATGCTAAATATTTTCCATCAACTCCCCCAGCTCGTTCAACATATCAGGTAGCTGCATTGCCATTGGATGCAAAGATTGAAATTGAGTGCATAGCAGCTCTATAA 570 0.4825 MASWCASRCFQIPAMDVAALRNRASIAAAAGVGCASIAGTSFLRSSKSKRALPFTCLSISTDASLKEAVKTEKAPAALGPYSQAIKSNNLLFVSGVLGLVPETGKFVSDNVEDQTEQILKNMGEILKAGGANYSSVVKTTIMLADLKDFKKVNEIYAKYFPSTPPARSTYQVAALPLDAKIEIECIAAL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0402 189 ProSitePatterns Uncharacterized protein family UPF0076 signature. 165 183 IPR019897 -
Ahy17g0402 189 PANTHER 2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDA 7 189 IPR006175 -
Ahy17g0402 189 TIGRFAM TIGR00004: reactive intermediate/imine deaminase 66 188 IPR006056 -
Ahy17g0402 189 CDD YjgF_YER057c_UK114_family 81 187 - -
Ahy17g0402 189 SUPERFAMILY YjgF-like 67 189 IPR035959 -
Ahy17g0402 189 Pfam Endoribonuclease L-PSP 72 188 IPR006175 -
Ahy17g0402 189 PANTHER BNAA05G36080D PROTEIN 7 189 - -
Ahy17g0402 189 Gene3D - 64 189 IPR035959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0402 Ahy-Chr17 3900932 3903713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0402 K09022 - gmx:100527559 293.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0402 17 3900932 3903713 Ahy17g0402 17 3900932 3903713 ECH
Ahy17g0402 17 3900932 3903713 Ahy7g0272 7 2176600 2179344 hybridization