Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0398 ATGGTGAAGGGACAAAACGCACCAAGCGAATTGAGACATGTTATTGATCAGCTGGAGCGTTACTGCATGGCACCCGATGGATCTCTCATGTCCATCAATGTTTACAACGATCTCCATCTTGCAAGAGAGGAAATGTGCAGGGAGAGAATACGCTACCTGGAAGCCATGGCAATATACTCCGAGGTGGTTGCAATGGTGGAAGAGTATCATGAATCATCGAGCTCCGGCGGAATAAGCGATTCTTCTGGTGGTCTTCATTCGCCACTTGGAACGATGAACTCATCTCAGGTGCATAAGACTTTAGAGCATCGGATGGCTGTGGCCGAGGCGGCTCAAAGATTGAGACTTCCACTTATTGCTGAAGATGGGAAACTTCATGAGCATGAAGATATTGAGAAGTTGAGTGTGGTGTCTAGAAGCTTCATTGATAGTAACAGTTCCAGTCCCAATGCCACCATCTATTCAAGCAATGCTGCAAATTATGCTACTCCAAGAAGCTCCATCAGTGGGGTTAATTCTGCATTCTCTGTTATAGTAGATTCGGCAGAACCAGGAATTTTTGGTGTCCCTGATCGCTTTTTGGGAATTACACCTGCTTATTTGTGGCAAAGTCAAATTCAAAAAACACCATCATCTGGGGATATGAGAGAATACTGCAAGTCTCTTTCCCGTGAGATAGACGATCGCCTGAAATTGAAATGTGATATGCTATTAAGTGCCTTTGTATTGGATGTCGACGAAAATAATTCTTTTTCATCTCCAAGTCTCAGAACGAGTTCTTTGCTTGCAGAAAGGGTGAAGTCAATGATTGAACAGATTGAAAGAGAAGAAACAGCATTGCGAGAGAACCTTTATTCTGCATATAGAAAGTTTGCTGAATACTATAATGTCCTGGAGCAGATACTTGGGGTGATTATTGAACTATTTAATAATTTTAAGTTGGGACATCAACATGATTATGATGAAGTGAAGAAGTCATGGCTCTGTCAAAGATGTGAGGCAATGGATGCAAAATTAAAGGTCTTAGAGCATTTTTTCCTTTATAAGACTTACAATGAAGAAACCGTACCTGCCCTATATAAGATAAGGGAATATATTGTTGAGGCTACTAAAGAAGCTTCCGATACTTATAATAAAGCGTTTACTCGCCTGATGGAATACCAAGGTCTTGATGATGAATTTGAGGACATGGCAAGGGAGTATGAGGATATTTTAGAGAAATTGGAAAATATGCAATGGACAATTCAACAAGTTGAGATGGATCTGAAATCATTTGCTAGATAA 1284 0.4065 MVKGQNAPSELRHVIDQLERYCMAPDGSLMSINVYNDLHLAREEMCRERIRYLEAMAIYSEVVAMVEEYHESSSSGGISDSSGGLHSPLGTMNSSQVHKTLEHRMAVAEAAQRLRLPLIAEDGKLHEHEDIEKLSVVSRSFIDSNSSSPNATIYSSNAANYATPRSSISGVNSAFSVIVDSAEPGIFGVPDRFLGITPAYLWQSQIQKTPSSGDMREYCKSLSREIDDRLKLKCDMLLSAFVLDVDENNSFSSPSLRTSSLLAERVKSMIEQIEREETALRENLYSAYRKFAEYYNVLEQILGVIIELFNNFKLGHQHDYDEVKKSWLCQRCEAMDAKLKVLEHFFLYKTYNEETVPALYKIREYIVEATKEASDTYNKAFTRLMEYQGLDDEFEDMAREYEDILEKLENMQWTIQQVEMDLKSFAR* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0398 427 PANTHER BNAA06G02620D PROTEIN 4 426 - -
Ahy17g0398 427 Coils Coil 263 283 - -
Ahy17g0398 427 Pfam HAUS augmin-like complex subunit 4 184 420 IPR029327 GO:0051225|GO:0070652
Ahy17g0398 427 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 4 426 IPR029327 GO:0051225|GO:0070652
Ahy17g0398 427 Coils Coil 387 421 - -
Ahy17g0398 427 MobiDBLite consensus disorder prediction 73 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0398 Ahy-Chr17 3856020 3859510 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0398 K16587 - gmx:100790889 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0398 17 3856020 3859510 Ahy17g0398 17 3856020 3859510 ECH
Ahy17g0398 17 3856020 3859510 Ahy7g0268 7 2143020 2146575 hybridization