Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0387 ATGAGTTATGGTACTAGAGTTTTGATTTTCATTTTCCTTGTTATTAGATGTGGATTTTCAAAGGGTGAACAAACGGTGGTTCCAGCAGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGAGAATCTCTGTTGCAAGAGCTGATCATCCTTACTATGGAATTGATTTTCCAACTCATAAACCCAATGGCAGATTCAGCAATGGCAAGAATGCTGCTGATTTCATTTCTGAGAAATTGGGATTGGCAACTTCGCCACCTTACCTGTCCCTAACTGCAAAATCAAATGCCAACAAAAACAATGTGTCCTTGGATGGTGTTAGCTTTGCATCCTCAGGTGCTGGAATATTCAATGGCACGGATGAACGTTTTAGACAGGCAATACCGTTGACAAAACAAGTGACTTACTACTCAGTTGTGTACGAGGATATGAAACGAGAAGCAGATGCTGCTGCTCTACAAAAGCGTCTCTCAAAATCAATTTTCGCTGTGGTGATTGGCAGCAATGATCTCTTTGGCTACTTACAATCATCAAATCTTCGTAAGAAAATCACTCCACAGCAGTATTTGGATTCCATGGTTTTCTCACTCAAAGTACAACTACAGCGATTATACAATCTTGGTGCTCGTAAATTTGAGATAGCTGGCATTGGGGCACTTGGATGTACCCCTGTATTTAGGGTCAGGAACAAAACGGAGTGCATTACAGATGGCAATTATTGGCCAATTAAATATAACGAAGGCCTTCAATCCATGCTTAAGGAATGGCAATTTGAGAATAGGGACATTACTTACTCCTTCTTTGACACTTATGCTGCTCATATGGACCTCATTCAGAATCCAGCTTCCTATGGATTTAGAGAGATCAAAGCTGCTTGTTGTGGATTCGGGGAACTGAATGCAAGGGGTCTTTGCTTACCACTGTCAAATCTTTGTTCCAATAGACAAGACCACATCTTCTGGGATTTGTTCCATCCTACAGAGGCAGCTAATCGTATCTTTGTCGACAAAATGTTTGATGGTTCTTCAAAGTACACGTCTCCTATTAACATGAGACAGCTAGTTGCAGCCTGA 1089 0.4086 MSYGTRVLIFIFLVIRCGFSKGEQTVVPAVYVFGDSLVDVGNNNYLRISVARADHPYYGIDFPTHKPNGRFSNGKNAADFISEKLGLATSPPYLSLTAKSNANKNNVSLDGVSFASSGAGIFNGTDERFRQAIPLTKQVTYYSVVYEDMKREADAAALQKRLSKSIFAVVIGSNDLFGYLQSSNLRKKITPQQYLDSMVFSLKVQLQRLYNLGARKFEIAGIGALGCTPVFRVRNKTECITDGNYWPIKYNEGLQSMLKEWQFENRDITYSFFDTYAAHMDLIQNPASYGFREIKAACCGFGELNARGLCLPLSNLCSNRQDHIFWDLFHPTEAANRIFVDKMFDGSSKYTSPINMRQLVAA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0387 362 CDD SGNH_plant_lipase_like 28 347 IPR035669 -
Ahy17g0387 362 SUPERFAMILY SGNH hydrolase 30 344 - -
Ahy17g0387 362 Gene3D SGNH hydrolase 20 349 IPR036514 -
Ahy17g0387 362 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 6 360 - -
Ahy17g0387 362 Pfam GDSL-like Lipase/Acylhydrolase 30 341 IPR001087 GO:0016788
Ahy17g0387 362 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0387 Ahy-Chr17 3747982 3750463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0387 27 346 Acyl Lipid Metabolism Gene Families AT4G10950 32.308 6.00e-57 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0387 - - gmx:100777307 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0387 17 3747982 3750463 Ahy17g0387 17 3747982 3750463 ECH
Ahy17g0387 17 3747982 3750463 Ahy7g0258 7 2018751 2020674 hybridization
Ahy17g0387 17 3747982 3750463 Ahy17g0387 17 3747982 3750463 PCT
Ahy17g0387 17 3747982 3750463 Ahy7g0258 7 2018751 2020674 PCT
Ahy7g0258 7 2018751 2020674 Ahy17g0387 17 3747982 3750463 PCT