Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0385 ATGGAGGCACCACCAACCTTTGTGTATAGAGCGAGAATGGCGTTTCATTCCGCAGCTGCAAAAGCGGAGCGGATTCTCAGCGACTTCAAATTCGATCAAGATCAAGAGAACAGCTTCACTAAGAATCTGGAATTTGAAATTGAATCTCCTCACAAGCTTTGCAGTGAGTTGAATAATATAAAGGGGAGGGAATCACCTCATATAGGAAGGAAGAAGGATTGGAAAGAGAGATTCAAGAATATTCGAATTGGGAGAAAAGAATTTGAAGATAAAGTTGGGGATGCAAACATGGCAATTCCATTTTATGATGAAAATTTGTACATCCTGAATATGAAGAATGATCTTGAGGCCAAGGCTGCAGAAGCAGTTCCCTTGGTTGAAAGCTTAACTTCTGATACAAAAGATCCAATTCCTAAGTCATCTGTGCTGAAGCAACTGGCTATAGCTTTTGAGGCTGGAAGTACAACAAAGTCATTGAAAGATTTTACAGCTTCGCCAGTAAGTTCACCAGCCTTGAGTTTCTCAGCAGTGAAGGCTTTAGTGATGCGGGAAAAGGAAGACAAACTTACCTCTGAGTTTAGTGGCGATGAGAGAGTTGTGAATTTGATTAAAGCTCTGTTTGATCCGGAGGGAGATTTTCTCAGTCGAAAGATTGACTCCAATCCAGGGGAAACTTCCATAACATCTTTGTGGGGAGACATTCATGGTGCTCCTCCTGAAAGCTTTGTTGTTAAGCTAGCTGAAATCATTGGAAACTTCAAGTCCATTCGAAAAATGGTTCTTTTCTGGTTCAGGGTTGTTGCTGAACTCAGAAAACATTGGTCTGAGGATCAATATTTACCTGGAGTGCCTCCGGATGATATTCCAGACCTGAAGGCATGTCTTCTGTATCAACAACTTCAAGTAATTAACTGTTGCATCTCTCGGAGAAGGCTCCGTGTTATTGCCACTGACACTCTGGATTCTATGATGATGGAAGCTAGTTCAAACATAAAAGAACCAATCAATTCTGAAGTCAGAAATCCTTCAAGTCCTGTTTTATATGCTAGAGTGAACACTGGGGATCTTGTTCTGCGACTTGGTGCAGTTCGACCAGCTAGAGATCTGACATTGTTGGAAACAGGCGAGCCTGTTTACTGTCCTGCTACCCAGGAAGGGCCTTTGCTTACAGAAGATCTAATCAGAGAAACAGAGGAGTTTGTACTGCGGACAGGGAGTGTTGGTGTTGGGTGTTCTCAACTCCTCTCCGACATGCAGGCTTTCAAGGCTGCAAATCCTGGATGTATTTTGGAGGATTTTGTAAGGTGGTACTCTCCTCCGGACTGGACACAAAATAAGGCAACTGCTGAGGATAGTGATGTTTTTGACGCTGGTGAATCACTTGATGGCAGAGGTTGCCTAAGTCGGCGAATGCAAAAAGAAGGTAATTTGTGGCGTGAATTATGGGAAACATCCAAACCAGTCCCAGCTGTCAAGCAGGCACCCCTCTTTGATGAAGAATTGGCGGTGGAGGGCATCCTCAATGCATTTGAAAAGATCCATACTTCTGAGTTTTTTAGACAGCTATTTGTTTCTCTGCTTGGTTTAGGCATTGAGAATGCAGAACCTATGCTATCCAATAATGGAGACTTCTCAAAGTTATTCTATGAGTGCAAGGAGTACATAGTTTCCACATGTCAAAGCAGCAAATTGAGTGAGCACATTGATGACCTTGTCCAGGTGTATCAAACAGTGGAGACAATGTTACTGAATCCTGAGGAAGCATTGAAAATGATGAAGCAGCCAGAAGAATCAGCTGTAGATGAACCAAAGAGCCGTCTTGCGAGGATTAGGCTTATCTTTAATGGCAAAGATAAACTGTTGAGGAGTCCTGTAACCAAAGATCAGATGAATTCTGAGGAAAAGCCAAAACAATCTTTCTCAAGTTTCTTTGAAGGCAAGTCATTGCTGTTTTCAAAGAAGTTACATAGTCCTCCATCTGGATGCCAATCGCCTGCTATCAAATCTTCGTCTCTCGACACAAATAACAGCTTCGCTGCGCCGGCACTTACTTAG 2055 0.4273 MEAPPTFVYRARMAFHSAAAKAERILSDFKFDQDQENSFTKNLEFEIESPHKLCSELNNIKGRESPHIGRKKDWKERFKNIRIGRKEFEDKVGDANMAIPFYDENLYILNMKNDLEAKAAEAVPLVESLTSDTKDPIPKSSVLKQLAIAFEAGSTTKSLKDFTASPVSSPALSFSAVKALVMREKEDKLTSEFSGDERVVNLIKALFDPEGDFLSRKIDSNPGETSITSLWGDIHGAPPESFVVKLAEIIGNFKSIRKMVLFWFRVVAELRKHWSEDQYLPGVPPDDIPDLKACLLYQQLQVINCCISRRRLRVIATDTLDSMMMEASSNIKEPINSEVRNPSSPVLYARVNTGDLVLRLGAVRPARDLTLLETGEPVYCPATQEGPLLTEDLIRETEEFVLRTGSVGVGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTQNKATAEDSDVFDAGESLDGRGCLSRRMQKEGNLWRELWETSKPVPAVKQAPLFDEELAVEGILNAFEKIHTSEFFRQLFVSLLGLGIENAEPMLSNNGDFSKLFYECKEYIVSTCQSSKLSEHIDDLVQVYQTVETMLLNPEEALKMMKQPEESAVDEPKSRLARIRLIFNGKDKLLRSPVTKDQMNSEEKPKQSFSSFFEGKSLLFSKKLHSPPSGCQSPAIKSSSLDTNNSFAAPALT* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0385 684 MobiDBLite consensus disorder prediction 657 684 - -
Ahy17g0385 684 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 675 IPR045700 GO:0005096|GO:0043547
Ahy17g0385 684 Pfam Rab3 GTPase-activating protein catalytic subunit 359 511 IPR026147 -
Ahy17g0385 684 MobiDBLite consensus disorder prediction 655 684 - -
Ahy17g0385 684 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 6 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0385 Ahy-Chr17 3732573 3738486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0385 K18270 - gmx:100818643 930.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0385 17 3732573 3738486 Ahy17g0385 17 3732573 3738486 ECH
Ahy17g0385 17 3732573 3738486 Ahy7g0256 7 2003063 2008957 hybridization
Ahy17g0385 17 3732573 3738486 Ahy17g0385 17 3732573 3738486 PCT
Ahy17g0385 17 3732573 3738486 Ahy7g0256 7 2003063 2008957 PCT
Ahy7g0256 7 2003063 2008957 Ahy17g0385 17 3732573 3738486 PCT