Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0383 ATGCTCGGTGTCATAAGGCGGAGGGTTGCTTCTAGCAGCCCATATCCCATGCTTTTAAGCCAGTCAGCGCGGAAATTCCGCTCTGGCTCCTCAGCTCCTGCCAGAGTTTCCTCCATTGTTGAAAAGGAGGTTTCATTTCATTCAGGACATTATGGGAATGTCCGGAACTTCTCTCACATGACACCTGGGTGCTGGGTCAATGTAAAACCTATGAGGGAGGTTTTTTGTCAAGAGGCTACCATGCAAACATGGAGGCGTCCATTTTCATCAGACAGTGGAGATAATGTTGATGTTGTGGTCCCTCCTTTGGCTGAATCTATTGCTGATGGAACCCTGGCAAAATTCTTGAAGAGGCCTGGTGACAGGGTTGCTGTTGATGAACCAATAGCTCAAATTGAAACAGATAAGGTGACAATTGACGTTTCTAGTCCGGAGTCAGGTGTGATTGTGAAGCTTCTAGCCAATGAAGGAGATACAGTTGAGCCAGGTAACAAGATAGCAATTATTTCAAGGTCTGCCGATGCTACTACTCATGTTGCTCCATCCGAGACTACATCTGAGAAAGCTGCTCCTCAGCCAACCCAAAAGACCAGTGAGGAGAAGAAAGCGCCTAAAGCTGAACCAGCACCTGCTAAAGAGAAACCCAAAGCACCCCCTGCTCCAGCGAGGCCTGCTGGTGCACAAAGTTCTCCTACTGAGCCACAGCTTCCCCCTAAGGAAAGGGAAAGACGAGTTCCTATGACAAGGCTTCGTAAACGTGTTGCTACCCGTTTGAAAGATTCCCAAAACACATTTGCCATGTTGACAACATTCAATGAAGTTGATATGACTAACTTGATGAAACTCCGTGCTGACTACAAGGATGCTTTTGTCGAAAAGCATGGAGTCAAGTTGGGACTTATGTCCGGGTTTGTCAAAGCTGCTGTCAATGCTCTCCAACATCAGCCAATTGTAAATGCAGTCATTGATGGGGATGATATCATATACAGAGATTACATAGATATCAGCATAGCTGTTGGTACACCAAAGGGTCTTGTTGTGCCAGTTATCCGCAATTGTGATACGATGAACTTTGCGGATATAGAGAAGCAGATCAATGCTTTTGCAAAGAAGGCAAATGATGGAACTCTATCAATTGATGAGATGGCTGGAGGCACACTCACAATATCTAATGGTGGTGTTTATGGAAGCCTCTTGAGTACCCCTATCATTAACCCTCCTCAGTCTGCAATCTTGGGCATGCATTCCATAGTGAGCCGTCCTATGGTGGTTGGAGGAAATGTTGTCCCAAGGCCTATGATGTACATTGCTCTAACATACGACCATAGAATTATTGATGGAAGAGAGGCAGTGTTCTTCTTGCGACGCATCAAGGATATCGTGGAGGATCCTCGCAGGCTTCTGCTCGACATATAA 1416 0.4597 MLGVIRRRVASSSPYPMLLSQSARKFRSGSSAPARVSSIVEKEVSFHSGHYGNVRNFSHMTPGCWVNVKPMREVFCQEATMQTWRRPFSSDSGDNVDVVVPPLAESIADGTLAKFLKRPGDRVAVDEPIAQIETDKVTIDVSSPESGVIVKLLANEGDTVEPGNKIAIISRSADATTHVAPSETTSEKAAPQPTQKTSEEKKAPKAEPAPAKEKPKAPPAPARPAGAQSSPTEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRADYKDAFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNCDTMNFADIEKQINAFAKKANDGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGGNVVPRPMMYIALTYDHRIIDGREAVFFLRRIKDIVEDPRRLLLDI* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0383 471 MobiDBLite consensus disorder prediction 174 250 - -
Ahy17g0383 471 Gene3D - 94 172 - -
Ahy17g0383 471 SUPERFAMILY CoA-dependent acyltransferases 241 470 - -
Ahy17g0383 471 TIGRFAM sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 214 470 IPR006255 GO:0004149|GO:0006099|GO:0045252
Ahy17g0383 471 MobiDBLite consensus disorder prediction 175 193 - -
Ahy17g0383 471 Pfam Biotin-requiring enzyme 97 169 IPR000089 -
Ahy17g0383 471 CDD lipoyl_domain 96 169 - -
Ahy17g0383 471 SUPERFAMILY Single hybrid motif 96 186 IPR011053 -
Ahy17g0383 471 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 241 469 IPR001078 GO:0016746
Ahy17g0383 471 MobiDBLite consensus disorder prediction 194 212 - -
Ahy17g0383 471 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX 1, MITOCHONDRIAL-RELATED 1 471 - -
Ahy17g0383 471 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 120 149 IPR003016 -
Ahy17g0383 471 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 1 471 - -
Ahy17g0383 471 MobiDBLite consensus disorder prediction 236 250 - -
Ahy17g0383 471 Gene3D - 226 467 IPR023213 -
Ahy17g0383 471 ProSiteProfiles Biotinyl/lipoyl domain profile. 95 170 IPR000089 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0383 Ahy-Chr17 3716556 3722356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0383 72 469 Acyl Lipid Metabolism Gene Families AT1G54220 29.221 1.31e-42 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0383 K00658 - gmx:100799149 737.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0383 17 3716556 3722356 Ahy11g0691 11 11602456 11613421 ECH
Ahy17g0383 17 3716556 3722356 Ahy17g0383 17 3716556 3722356 ECH
Ahy17g0383 17 3716556 3722356 Ahy7g0254 7 1985218 1990978 hybridization