Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0381 ATGGAGTCGCCGCCATTCCATTTCTACTCTGCTTCGCGACCCACCATCTCTCTCCCTTCATATTCTTCTTCTTCATTCCTTTTTCTTCATAAAAATCCTTCATTCATAAAAACCTCACGTTCCACCAACGTCAGCTACTCAAGAAGCTTCTCTGTTCGTGCTTCTTCTTCTTCTACCAGTGATTCTGTGGTGACTCTGCTTGATTATGGGGCTGGCAATGTTCGAAGTGTTAGGAATGCTATCAAGCACCTTGGTTTTGATATCAAAGATGTGCAAACTCCAGAAGACATTTTGAATGCAAGCCGGCTTATATTTCCTGGTGTTGGAGCATTCGGCAATGCCATGGATGTCTTGAACAAGACAGGAATGGCTGAAGCACTGTGTGCATATATCGAAAAGGATCGCCCATTTTTAGGGATTTGTCTTGGACTTCAACTACTTTTTGAATCCAGTGAGGAGAATGGACCAGTAAAGGGTCTTGGCCTGATCCCTGGAACTGTTGGGCGATTTGATTCATCAAATGGTTTTAGAGTCCCGCATATTGGCTGGAATGCTTTACACATTACAAAGGACTCGGGAATTTTGGATGATGTTGGAAAACGCCATGTATATTTTGTGCACTCTTACCGTGCCATGCCTTCTGATAACAACAAAGAATGGGTCTCCTCCACCTGCAACTATGGTGATACATTTATAGCATCTATTAGACGAGGAAATGTGCATGCAGTTCAATTCCATCCAGAAAAGAGTGGAGATGTTGGTCTTTCTATTTTGAGGAGATTTTTGTATCCAAAGTCGCAAATGACAAAGAAGCCTGGTGAAGGGAAAGCCTCAAAACTTGCACAAAGGGTGATTGCTTGTCTCGATGTGAGGGCAAATGATAAGGGAGACCTTGTTGTAACCAAAGGAGACCAGTATGATGTAAGAGAAAACACAAATGAGAAGGAGGTGAGGAATCTTGGAAAGCCAGTTGAGCTTGCTAGACAGTACTATTTAGATGGTGCTGATGAGGTTAGCTTCCTAAATATTACTGGTTTTCGTGACTTCCCTCTTGGCGACTTGCCAATGTTGCAGGTATTGAAATACACATCAGAAAATGTTTTTGTACCCTTGACAGTTGGGGGTGGGATTAGAGATTTTACAGATGCGAATGGCAGGCACTACACTAGTTTGCAAGTTGCTTCAGAATATTTTAGGTCCGGAGCTGATAAGATATCCATTGGAAGTGACGCAGTTTATGCTGCAGAAGAATATCTGAGAACTGGAGTGAAAACTGGAAAGACCAGCTTAGAGCAGATTTCCAGAGTTTACGGAAATCAGGCAGTGGTGGTTAGTATCGATCCTCGTAGGGTGTATGTAAAGAATCCCACAGATGTTCAGTTCAAGACTATAAGGGTGTCAAATCGAGGTCCAAATGGAGAGGAATATGCCTGGTATCAGTGTACAGTAAATGGAGGGCGAGAAGGCCGGCCGATAGGTGCTTATGAGTTAGCGAAAGCAGTTGAAGAACTTGGTGCCGGAGAAATACTACTCAACTGCATAGACTGTGATGGTCAAGGAAAAGGATTTGATATAGATTTAGTTAAGTTGATCTCAGATGCTGTAAGTATCCCGGTGATCGCAAGTAGTGGTGCCGGTGCTGCTGAACACTTCTCTGAGGTGTTCGCGAAAACAAATGCTTCTGCTGCGCTTGCTGCCGGCATTTTTCACAGAAAGGAGGTGCCTATTCAAACTGTAAAAGAGCATTTGTTGAAGGAAGGTATAGAAGTCCGAATCTGA 1779 0.4334 MESPPFHFYSASRPTISLPSYSSSSFLFLHKNPSFIKTSRSTNVSYSRSFSVRASSSSTSDSVVTLLDYGAGNVRSVRNAIKHLGFDIKDVQTPEDILNASRLIFPGVGAFGNAMDVLNKTGMAEALCAYIEKDRPFLGICLGLQLLFESSEENGPVKGLGLIPGTVGRFDSSNGFRVPHIGWNALHITKDSGILDDVGKRHVYFVHSYRAMPSDNNKEWVSSTCNYGDTFIASIRRGNVHAVQFHPEKSGDVGLSILRRFLYPKSQMTKKPGEGKASKLAQRVIACLDVRANDKGDLVVTKGDQYDVRENTNEKEVRNLGKPVELARQYYLDGADEVSFLNITGFRDFPLGDLPMLQVLKYTSENVFVPLTVGGGIRDFTDANGRHYTSLQVASEYFRSGADKISIGSDAVYAAEEYLRTGVKTGKTSLEQISRVYGNQAVVVSIDPRRVYVKNPTDVQFKTIRVSNRGPNGEEYAWYQCTVNGGREGRPIGAYELAKAVEELGAGEILLNCIDCDGQGKGFDIDLVKLISDAVSIPVIASSGAGAAEHFSEVFAKTNASAALAAGIFHRKEVPIQTVKEHLLKEGIEVRI* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0381 592 CDD GATase1_IGP_Synthase 66 262 IPR010139 GO:0000105|GO:0016763
Ahy17g0381 592 Gene3D - 59 284 IPR029062 -
Ahy17g0381 592 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H IGP SYNTHASE SUBUNIT HISF/H 75 592 - -
Ahy17g0381 592 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 63 271 - -
Ahy17g0381 592 PANTHER IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE HISHF 75 592 - -
Ahy17g0381 592 Hamap Imidazole glycerol phosphate synthase subunit HisH [hisH]. 63 264 IPR010139 GO:0000105|GO:0016763
Ahy17g0381 592 Gene3D Aldolase class I 285 592 IPR013785 -
Ahy17g0381 592 Pfam Histidine biosynthesis protein 283 574 IPR006062 GO:0000105
Ahy17g0381 592 TIGRFAM hisF: imidazoleglycerol phosphate synthase, cyclase subunit 280 591 IPR004651 GO:0000105|GO:0000107
Ahy17g0381 592 Pfam Glutamine amidotransferase class-I 66 261 IPR017926 -
Ahy17g0381 592 PIRSF IGPS_HisHF 61 592 IPR014640 GO:0000105|GO:0000107|GO:0016763|GO:0016833
Ahy17g0381 592 CDD HisF 283 586 IPR004651 GO:0000105|GO:0000107
Ahy17g0381 592 TIGRFAM IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 64 262 IPR010139 GO:0000105|GO:0016763
Ahy17g0381 592 SUPERFAMILY Class I glutamine amidotransferase-like 63 263 IPR029062 -
Ahy17g0381 592 SUPERFAMILY Ribulose-phoshate binding barrel 279 591 IPR011060 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0381 Ahy-Chr17 3707649 3713007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0381 K01663 - qsu:111998074 991.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0381 17 3707649 3713007 Ahy17g0381 17 3707649 3713007 ECH
Ahy17g0381 17 3707649 3713007 Ahy7g0251 7 1976136 1981495 hybridization