Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0351 ATGGCTGCTACTTCATTGTTATCCTCGTGCTGCATGCATATGGGAATGGTTCCTCCCAAAATGGCTGCAAATTATTTGAGCGCTCAGCCATTTGATCATCTGAAGTTAAGGTCATTTGGGGGTCCGGAATCATCGGAAAAATTAAAACTTTTGCACAAAGGTGATGAGTTCCTGTGCCGGGTTGCTCAGGTTGAAAGAGTGCCTTCCTTCTCTGTGGGGCAAAAGTTTCAGCTTGATGATGTGATTGAAGCTCAGCAATTTGATAGAGATACACTTGGTGCCATATTTGAAGTTGCAAGGAACATGGAGAATATTGAAAAGAGCCAAATTCTAAAGGGATATCTCATGGCTACCTTGTTCTATGAGCCATCAACAAGAACTAGGCTTTCATTTGAATCTGCAATGAAAAGGTTAGGTGGGGAAGTTCTCACAACTGAAAATGCAAGGGAGTTTTCCTCCGCGGCTAAGGGAGAGACGCTTGAAGATACCATAAGAACAGTTGAAGGTTACTCTGATATAATCGTGATGCGCCATTTTGAAAGCGGAGCTGCCAAAAGAGCAGCAGTAACTGCTGGCATTCCTGTGATCAATGCCGGGGATGGACCAGGAGAGCATCCCACACAGGCACTGCTGGATGTTTATACCATTGAAAGAGAGATTGGAAAACTTGATGGCATTAAAGTTGGACTCGTCGGAGACCTTGCTAATGGAAGGACGGTTCGGTCACTAGCATACTTACTTGCCAAGTATAAGGATGTGAAAATTTATTTTGTCTCTCCTGAGGTGGTTAAAATGAAGGATGACATAAAATATTATTTGACATCAAAGGGTGTGGAGTGGGAGGAAAGTGGTGACTTGATGGAAGTGGCTTCAAAGTGTGATGTGGTTTACCAAACTCGCATTCAGAAAGAGAGATTTGGAGAGAGATTTGACCTTTATGAAGAAGCAAGAGGCAAGTACATTGTGAATCAAGATGTTCTGAATGTGATGCAAAAACATGCTGTGGTTATGCATCCTCTTCCTAGACTTGATGAGATTACTGTGGATGTTGATGATGATCCAAGAGCTGCTTACTTTAGGCAAGCAAAGAATGGTCTATATATTAGGATGGCCCTTTTAAAGGTTTTGCTTCTTGGTTGGTAA 1143 0.4243 MAATSLLSSCCMHMGMVPPKMAANYLSAQPFDHLKLRSFGGPESSEKLKLLHKGDEFLCRVAQVERVPSFSVGQKFQLDDVIEAQQFDRDTLGAIFEVARNMENIEKSQILKGYLMATLFYEPSTRTRLSFESAMKRLGGEVLTTENAREFSSAAKGETLEDTIRTVEGYSDIIVMRHFESGAAKRAAVTAGIPVINAGDGPGEHPTQALLDVYTIEREIGKLDGIKVGLVGDLANGRTVRSLAYLLAKYKDVKIYFVSPEVVKMKDDIKYYLTSKGVEWEESGDLMEVASKCDVVYQTRIQKERFGERFDLYEEARGKYIVNQDVLNVMQKHAVVMHPLPRLDEITVDVDDDPRAAYFRQAKNGLYIRMALLKVLLLGW* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0351 380 Gene3D Aspartate/ornithine carbamoyltransferase 205 364 IPR036901 GO:0006520|GO:0016597|GO:0016743
Ahy17g0351 380 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 332 341 IPR006130 GO:0006520|GO:0016597|GO:0016743
Ahy17g0351 380 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 120 139 IPR006130 GO:0006520|GO:0016597|GO:0016743
Ahy17g0351 380 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 342 365 IPR006130 GO:0006520|GO:0016597|GO:0016743
Ahy17g0351 380 PRINTS Aspartate/ornithine carbamoyltransferase superfamily signature 205 216 IPR006130 GO:0006520|GO:0016597|GO:0016743
Ahy17g0351 380 ProSitePatterns Aspartate and ornithine carbamoyltransferases signature. 120 127 IPR006130 GO:0006520|GO:0016597|GO:0016743
Ahy17g0351 380 PANTHER CARBAMOYLTRANSFERASE FAMILY MEMBER 20 380 - -
Ahy17g0351 380 TIGRFAM asp_carb_tr: aspartate carbamoyltransferase 80 377 IPR002082 GO:0004070|GO:0006207
Ahy17g0351 380 SUPERFAMILY Aspartate/ornithine carbamoyltransferase 76 377 IPR036901 GO:0006520|GO:0016597|GO:0016743
Ahy17g0351 380 PRINTS Aspartate carbamoyltransferase signature 110 132 - -
Ahy17g0351 380 PRINTS Aspartate carbamoyltransferase signature 204 221 - -
Ahy17g0351 380 PRINTS Aspartate carbamoyltransferase signature 358 372 - -
Ahy17g0351 380 PRINTS Aspartate carbamoyltransferase signature 336 341 - -
Ahy17g0351 380 PRINTS Aspartate carbamoyltransferase signature 296 305 - -
Ahy17g0351 380 PRINTS Aspartate carbamoyltransferase signature 150 159 - -
Ahy17g0351 380 Pfam Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 224 374 IPR006131 GO:0006520|GO:0016597|GO:0016743
Ahy17g0351 380 PANTHER ASPARTATE CARBAMOYLTRANSFERASE, CATALYTIC CHAIN 20 380 - -
Ahy17g0351 380 Hamap Aspartate carbamoyltransferase [pyrB]. 78 379 IPR002082 GO:0004070|GO:0006207
Ahy17g0351 380 Pfam Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 80 217 IPR006132 GO:0006520|GO:0016743
Ahy17g0351 380 Gene3D Aspartate/ornithine carbamoyltransferase 81 373 IPR036901 GO:0006520|GO:0016597|GO:0016743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0351 Ahy-Chr17 3198203 3201161 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0351 K00609 - gmx:100802354 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0351 17 3198203 3201161 Ahy17g0351 17 3198203 3201161 ECH
Ahy17g0351 17 3198203 3201161 Ahy7g0241 7 1872245 1875131 hybridization