Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0343 ATGGAATTCGACCCGATCCCAATCGGTTCCTGCTCCAAAGAGAACCAGATCATCTACCAGCAGTGGTTCAATTACGCCGATTCAGATGGCGATGGCCGCATTACGGGGAGTGATGCCACCAAGTTTTTCGCCATGTCCAATTTGTCTCGCCAGGATCTTAAGCAGGTGTGGGCTATTGCGGATTCGAAGCGACAAGGATATCTTGGTTTTGCAGAGTTCATCATTGCTATGCAGCTAATTTCTTTGGCACAATCCGGCCAACCAATAACACAAGATCTTCTTTCTAGTGGTGTTGAGCTGAAAAACTTGAAACCTCCCACAATGGATGGTTTGGATGTATTAATGGCTAAGAAAAGGCATAAAGAAAAAGAAGTTGATTCAAATGGTAGTTCTCCATTGCAGCCATCACCATCTTCAAGTAGTTGGTTCTCTTCGAAGTCAACAAAAAAGGTTTCACTTTCCTCCGTGACCTCAATAATTGATGGCTTGAAGAAACTCTACATCCAGAAGTTGAGGCCATTAGAAGCTACTTATCGTTTTAATGATTTTGTATCCCCATTACTGACAAATAGTGACTTTGAAGCAAAGCCAATGGTTATGCTTTTGGGTCAATACTCAACTGGTAAAACAACATTTATCAAACATCTACTTAAAAGTAGTTATCCAGGAGCCCATATTGGACCGGAGCCTACAACTGATCGGTTTGTTGTTGTCATGTCTGGACCTGACGAGAGAAGCATTCCTGGAAATACTGTTGCTGTCCAAGCAGACATGCCATTTAGTGGTCTTACAAGTTTTGGCACCGCATTTTTGTCAAAATTTGAGTGCTCTCAAATGCCTCATCCGCTACTGGACCACATTACATTTGTGGACAGTCCCGGAGTTTTATCCGGAGAAAAGCAACGAACACAACGGGCATATGATTTTACAGGTGTAACATCTTGGTTTGCTGCCAAATGTGATTTGATACTCCTCCTGTTTGATCCTCACAAGCTTGATATTAGTGATGAATTCAAGCGTGTGATCTCATCCTTGCGTGGGCATGATGACAAAATTCGAGTAGTTTTGAACAAGGCAGACCAAGTTGATACTCAACAACTAATGAGAGTTTATGGAGCATTGATGTGGTCACTTGGGAAGGTGCTGAATACACCTGAAGTCATGCGTGTGTATATCGGCTCCTTCAACGATAAACCCATAAATGATGCTGTCAGTGGTCCAATCGGTAAGGAACTCTTTGAAAAAGAACAAGAGGACCTTCTTTCAGACCTAAAAGATATACCAAAGAAGGCCTGTGATCGAAGAATCAACGAATTTGTAAAACGGGCACGAGCTGCCAAGATACATGCTTACATTATCAGTCATCTTAAAAAGGAGATGCCTGCTATGATGGGCAAAGCTAAAGCTCAGCAAAAGCTTATTGATAATCTGGCTGCAGCATTTGGAAAGGTACAAAGGGAGTTTCATCTACCTCCTGGAGACTTCCCAGATGTTGAACATTTCAGAGAGACTCTAAGTGGTTATAATTTTGACAAGTTTGAGAAATTGAAACCAAAAATGATACAGGCAGTAGATGACATGTTAGGTTATGACATTCCAAACCTCTTGAAAAATTTTAGGAATCCATATGATTAG 1635 0.4153 MEFDPIPIGSCSKENQIIYQQWFNYADSDGDGRITGSDATKFFAMSNLSRQDLKQVWAIADSKRQGYLGFAEFIIAMQLISLAQSGQPITQDLLSSGVELKNLKPPTMDGLDVLMAKKRHKEKEVDSNGSSPLQPSPSSSSWFSSKSTKKVSLSSVTSIIDGLKKLYIQKLRPLEATYRFNDFVSPLLTNSDFEAKPMVMLLGQYSTGKTTFIKHLLKSSYPGAHIGPEPTTDRFVVVMSGPDERSIPGNTVAVQADMPFSGLTSFGTAFLSKFECSQMPHPLLDHITFVDSPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDISDEFKRVISSLRGHDDKIRVVLNKADQVDTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPINDAVSGPIGKELFEKEQEDLLSDLKDIPKKACDRRINEFVKRARAAKIHAYIISHLKKEMPAMMGKAKAQQKLIDNLAAAFGKVQREFHLPPGDFPDVEHFRETLSGYNFDKFEKLKPKMIQAVDDMLGYDIPNLLKNFRNPYD* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0343 544 Pfam Cytoskeletal-regulatory complex EF hand 26 80 IPR000261 GO:0005515
Ahy17g0343 544 Pfam N-terminal EH-domain containing protein 162 194 IPR031692 -
Ahy17g0343 544 SUPERFAMILY EF-hand 11 91 IPR011992 -
Ahy17g0343 544 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 193 429 IPR030381 GO:0005525
Ahy17g0343 544 CDD EHD 198 442 - -
Ahy17g0343 544 PANTHER EH DOMAIN 19 542 - -
Ahy17g0343 544 Gene3D - 10 109 - -
Ahy17g0343 544 SMART eh_3 8 103 IPR000261 GO:0005515
Ahy17g0343 544 MobiDBLite consensus disorder prediction 119 145 - -
Ahy17g0343 544 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 466 IPR027417 -
Ahy17g0343 544 ProSiteProfiles EF-hand calcium-binding domain profile. 48 83 IPR002048 GO:0005509
Ahy17g0343 544 Pfam Domain of unknown function (DUF5600) 434 535 IPR040990 -
Ahy17g0343 544 MobiDBLite consensus disorder prediction 128 145 - -
Ahy17g0343 544 CDD EH 19 85 IPR000261 GO:0005515
Ahy17g0343 544 Gene3D - 199 427 IPR027417 -
Ahy17g0343 544 ProSiteProfiles EH domain profile. 15 104 IPR000261 GO:0005515
Ahy17g0343 544 Gene3D - 163 535 - -
Ahy17g0343 544 SMART efh_1 18 46 IPR002048 GO:0005509
Ahy17g0343 544 SMART efh_1 52 80 IPR002048 GO:0005509
Ahy17g0343 544 PANTHER CALCIUM-BINDING EF HAND PROTEIN 19 542 - -
Ahy17g0343 544 Pfam Dynamin family 199 358 IPR045063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0343 Ahy-Chr17 3116122 3120411 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0343 1 544 EF-hand Containing Proteins AT3G20290 83.119 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0343 K12483 - gmx:100804468 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0343 17 3116122 3120411 Ahy17g0343 17 3116122 3120411 ECH
Ahy17g0343 17 3116122 3120411 Ahy7g0232 7 1776335 1780671 hybridization