Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0338 ATGTCTTCCACTCCAAAACATCTCCGAAATATCTCTACATCATCAATGAGAGATATCAATAATGAATTCCATAACTGTAACTCTCCAAGAACTCCAGGTTTTATTCGCCAACGAAAGCATTCACACTCAAACGAGATTCCTGCAGAGATAAGCAAATTAAATGGGACTAACCATTTGCTTATCGATGACAAAGCTAAGTACAAGTCAATGTGGATACGTGCATACTCATCACTATGGATGCTTTTAAGTCTCTTACTTCTCATATACTTGGGTCATCTTTACATGTGGGCCATGGTGGTTGTTATTCAAATCTTTATGGCACATGAACTCTTCAATCTACTAAGAAAGGCTAATACTAATAATCAAGATAAACGTCTCCCTAAGTTTAAGTTCTTGAACTGGCATTTTTTCTTCACAGCAATGCTATACGTATATGGGCGTATTCTGAGTCAGCAACTTGTGAATACAGTTTCATCAGATAAATTCCTATATAGACTTGTCAGCAACGTCATCAAGTATCAGATGGTTATATGTTACTTCCTATATATTGCAGGTTTTGTATGGTTTATTCTTTCACTAAGGAAGAGATATTACAAGTACCAATTTGGTCAATATGCATGGATTCATATGATACTCATTGTTGTGTTTGCCCAATCTGCATTCACTGTAGCCAATATATTTGAAGGCATATTCTGGTTTCTTTTCCCTGCAGGGCTAATTGCAATGAATGATGTTGCTGCATATTTCTTTGGTTTCTTTTTTGGGAGGACACCTCTTATAAAGCTTTCTCCAAAGAAAACATGGGAAGGTTTCATTGGAGCTTCTGTTGCCACCATGATTGCTGCATTTGCGTTTGCTAACTTCTTGGGTCGCTTCCATTGGCTAACATGTCCAAGGAAGGACTTATCAACTGGTTGGCTTAAGTGTGACCCTGATCCAATATTTAAGCCAGAGTACATTCCTTTACCAACATTAATTGCTCAATGGCTTCCTTGGAAAGAGATAGCAGTTTTGCCAGTACAGTGGCATGCCTTGTGGATGGGACTATTTGCCTCCATTATAGCACCATTTGGAGGATTTTTTGCAAGTGGTTTCAAAAGGGCTTTCAAAATCAAGGACTTTGGAGACAGTATACCTGGACATGGTGGAGTCACTGACAGAATGGATTGTCAGATGGTAATGGCTGTTTTTGTCTACATCTACTATCAATCATTCATTGCTCCCCATGACTATTCAGTTGAGATGGTTTTAGGCCAGGTATTGAGGAACCTTGATATGGAGGAGCAACATGCTCTTTACAACAAGCTGGGGCAGGTTTTAAGAGAAAGCCGTTTCATTCAAGATTGA 1347 0.3883 MSSTPKHLRNISTSSMRDINNEFHNCNSPRTPGFIRQRKHSHSNEIPAEISKLNGTNHLLIDDKAKYKSMWIRAYSSLWMLLSLLLLIYLGHLYMWAMVVVIQIFMAHELFNLLRKANTNNQDKRLPKFKFLNWHFFFTAMLYVYGRILSQQLVNTVSSDKFLYRLVSNVIKYQMVICYFLYIAGFVWFILSLRKRYYKYQFGQYAWIHMILIVVFAQSAFTVANIFEGIFWFLFPAGLIAMNDVAAYFFGFFFGRTPLIKLSPKKTWEGFIGASVATMIAAFAFANFLGRFHWLTCPRKDLSTGWLKCDPDPIFKPEYIPLPTLIAQWLPWKEIAVLPVQWHALWMGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGVTDRMDCQMVMAVFVYIYYQSFIAPHDYSVEMVLGQVLRNLDMEEQHALYNKLGQVLRESRFIQD* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0338 448 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 25 445 IPR016720 GO:0004605
Ahy17g0338 448 Pfam Cytidylyltransferase family 72 405 - -
Ahy17g0338 448 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 3 25 445 - -
Ahy17g0338 448 ProSitePatterns Phosphatidate cytidylyltransferase signature. 363 389 IPR000374 GO:0016020|GO:0016772
Ahy17g0338 448 PIRSF CDP-DAG_synth_e 11 448 IPR016720 GO:0004605
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0338 Ahy-Chr17 3095645 3099982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0338 3 442 Lipid Metabolism Gene Families AT4G26770 68.820 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0338 K00981 - gmx:100805363 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0338 17 3095645 3099982 Ahy17g0338 17 3095645 3099982 ECH
Ahy17g0338 17 3095645 3099982 Ahy7g0227 7 1756133 1760572 hybridization