Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0332 ATGGCTCCAATGGGAGACAATGTTGTTGTGTCCAACATAGAACTGGAAAAGTTACTTAGCATGAAAGGAGGCAAAGGAGAATCCAGTTATGCCAACAATTCCCAAGCACAGGCAATGCATGCCAAGTCTATGCTTCACCTGTTGAAGGAAACCCTAGATAGAGTTCAGCTTCATGGTTGTTCCGATGATAATGAAATCCCATTTGTGGTGGTGGATTTGGGTTGTTCATGTGGCAACAACACCATTAACGTTGTTGATGTCATCATAAAGCACATAATCAAGCGCTATGAGGCTTTAGGGTTCAATCCACCTGAATTTTCAGCTTTCTTCTCTGACCTTCCTAGTAATGACTTCAACACACTCTTCCAGCTTCTTCCGCCGCATCTTTCTAATGATAACGGCGGAGTTAGCATGGAAGAGTGTCTTGCTGCCAACAACCACCGCTCGTACTTTGCGGCCGGAGTCCCCGGTTCTTTCTATCGGAGACTTTTTCCGGCGAGATCTGTTGATGTTTTTCACTCGGCCTTTTCTTTGCATTGGTTGTCTCAGGTGCCAGAATGTGTGGTTGAGAAAAGGTCAAGTGCATATAACAAAGGAAGGGTATTTATCCATGGAGCAAATGAAAGCACAGCAAATGCATACAAGAAACAATTCCAAAGAGACTTGGCAGGGTTTTTGAGTGCAAGATGTGTGGAGATGAAGAGAGGTGGGTCCATGTTCTTGGTCTGCTTGGGAAGAACTTCTGTGGACCCCACTGACCAAGGTGGTGCTGGCCTTCTCTTTGGGACCCACTTTCAGGATGCTTGGGATGATCTTGTCCATGAGGGATTAATAAGCAGTTCAAAAAGGGACAGTTTCAACATTCCAGTGTATGCACCAAGCTTGCAAGATTTCAAGGAAGTGGTTGAAGAAAATGGTTCATTTGTGATAAACAAGATTGAAGTGTTCAAAGGAGGGAGCCCCCTTGTTGTTAACAAACCAGATGATGCAATTGAAGTTGGAAAAGCATTTGCCAACAGTTGCAAAAGTGTGTCCGGTGTGCTTGTTGACGCTTTTATTGGTGACAAACTCAGTGAAGAATTGTTTCTTAGAGTTCAGAAAAGAGCCACCGCACATGCTAAAGTCTTACTTCACCAGCTTCAATTTTTTCACATTGTTGCATCCCTTTCTTTTCCTCAATCACAATAA 1188 0.4369 MAPMGDNVVVSNIELEKLLSMKGGKGESSYANNSQAQAMHAKSMLHLLKETLDRVQLHGCSDDNEIPFVVVDLGCSCGNNTINVVDVIIKHIIKRYEALGFNPPEFSAFFSDLPSNDFNTLFQLLPPHLSNDNGGVSMEECLAANNHRSYFAAGVPGSFYRRLFPARSVDVFHSAFSLHWLSQVPECVVEKRSSAYNKGRVFIHGANESTANAYKKQFQRDLAGFLSARCVEMKRGGSMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVHEGLISSSKRDSFNIPVYAPSLQDFKEVVEENGSFVINKIEVFKGGSPLVVNKPDDAIEVGKAFANSCKSVSGVLVDAFIGDKLSEELFLRVQKRATAHAKVLLHQLQFFHIVASLSFPQSQ* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0332 395 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 11 390 IPR005299 GO:0008168
Ahy17g0332 395 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 14 390 IPR029063 -
Ahy17g0332 395 Gene3D Vaccinia Virus protein VP39 33 319 IPR029063 -
Ahy17g0332 395 PANTHER INDOLE-3-ACETATE O-METHYLTRANSFERASE 1 11 390 - -
Ahy17g0332 395 Pfam SAM dependent carboxyl methyltransferase 64 389 IPR005299 GO:0008168
Ahy17g0332 395 Gene3D - 19 373 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0332 Ahy-Chr17 3040489 3046024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0332 K18848 - gmx:100807953 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0332 17 3040489 3046024 Ahy17g0332 17 3040489 3046024 ECH
Ahy17g0332 17 3040489 3046024 Ahy7g0220 7 1706096 1711295 hybridization
Ahy17g0332 17 3040489 3046024 Ahy17g0332 17 3040489 3046024 PCT
Ahy17g0332 17 3040489 3046024 Ahy7g0220 7 1706096 1711295 PCT
Ahy7g0220 7 1706096 1711295 Ahy17g0332 17 3040489 3046024 PCT