Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0330 ATGGCTCCATCACTTCTCTTCCTTCTTATATCACTTCTCTTCATTCAAAGCAGTGGTGATCTCCAACAACACAATGAAGAGGGTCACATCTCTGTGATGATATCTGATAAGGGTCTTGACTTTGCCAAGGATTTGCTGATAGACAAAGCTATTGCCTCCATTGTTATGTCTCAGCTTCCAGAGATTGAGAAGTCAGTGCAAGTTCCACTTGTTGGAAAAGCAAAAGTGGTTCTTTCTGAGATCACAATCAAAGATATCCAAATAAACTCTTCAACGGTTGAGACTGGAGATTCAGGAATTGTTGTGGTAGTTTCTGGTGCCACTGCAAACTTGAACATGAATTGGAGGTATAGTTGTAGCAGTTGGTTAGTCCCAATTGGAATCTCTGATAGTGGAACTGCCACTGTTAAGGTTAAAGATCTGGAAGTGGGGCTTACAGTAAATTTAAGGAACCAAGGAGGAACTCTTAAGTTAATTCTATTAGATTATGGATGTAATGTTGGAGATATCTCTATAAAGTTGAATGGTGGAGCAGCATGGCTTTACCAAGTTTTAGTGGATGCTTTTGAAGGAAACATAGCTTCTTCAGTTGAAGATGCCATTTCAAAGAAAATAAGAGAAGGGATATCAACACTTGACAACTTATTGCAGTCTCTTCCACAGACAATCTCAATTGACCAAACTGCTGTTCTAAATGTTTCTTTTGTGGACAATCCTGTGCTGAGTAACTCTTCCATTGAAGTTGAAATCAATGGTTTGTTCATAGGGACAAACAAAGTTTTAGTACCTCGAAGTAGCCTCAACAGATTGGAGACTTCAACTTCTTGTGGAGGATCACCAAAGATGATCAAGATTTCAATACATGAAGATGTTTTCAACTCTGCTTCCTCTGTTTACTTCACAGCAGATAGTATGCAATGGATTCTTGATGAGTTACCTGATCAGAATCTTTTGAACACTGCTGAATGGAGATTCATAGTTCCACAATTGTTCAAGCAATATCCAAATGATGACATGAATCTCAATATCTCTGTATCCTCTGCACCGGTAATACAAGTAACTAACCAAGATATCAAAGCAACCATTAACTTAGACATCATAATTGATGTTCTTGAATCCGGTCAAGTGATACCTGTTGCATGCATCTCAGTGGATATTAGTGCTTCTTTTGCTGCAGAAATCATAGGAAACAATGTTACTGGTAAACTCAAATTGATAAAGTTTTCAACAAACTTGAAGTGGAGCAAAATTGGAAAACTACACATGCAACTGATTCAGTCCCTGACATCAAGTGTCCTCAAAACTGTCATCATACCATACCTTAACTCACAACTTAAGAGGGGAATTGAATTGCCAATTCTTGATGGTTTCGCCGTCAGTAATGCGCGAATCGCGTATGCTCAGCCGTGGATTGAATTGTGCAGTGATGTTTCCTTCTCAGGAGACTCATATCTGATGCTGCTGCCAGCTTCAGTATCATAA 1482 0.3893 MAPSLLFLLISLLFIQSSGDLQQHNEEGHISVMISDKGLDFAKDLLIDKAIASIVMSQLPEIEKSVQVPLVGKAKVVLSEITIKDIQINSSTVETGDSGIVVVVSGATANLNMNWRYSCSSWLVPIGISDSGTATVKVKDLEVGLTVNLRNQGGTLKLILLDYGCNVGDISIKLNGGAAWLYQVLVDAFEGNIASSVEDAISKKIREGISTLDNLLQSLPQTISIDQTAVLNVSFVDNPVLSNSSIEVEINGLFIGTNKVLVPRSSLNRLETSTSCGGSPKMIKISIHEDVFNSASSVYFTADSMQWILDELPDQNLLNTAEWRFIVPQLFKQYPNDDMNLNISVSSAPVIQVTNQDIKATINLDIIIDVLESGQVIPVACISVDISASFAAEIIGNNVTGKLKLIKFSTNLKWSKIGKLHMQLIQSLTSSVLKTVIIPYLNSQLKRGIELPILDGFAVSNARIAYAQPWIELCSDVSFSGDSYLMLLPASVS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0330 493 Pfam LBP / BPI / CETP family, N-terminal domain 38 212 IPR017942 GO:0008289
Ahy17g0330 493 Gene3D - 30 468 - -
Ahy17g0330 493 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 487 - -
Ahy17g0330 493 PIRSF Lipid_binding_protein 6 484 IPR030675 GO:0005615|GO:0008289
Ahy17g0330 493 Gene3D - 37 217 - -
Ahy17g0330 493 Pfam LBP / BPI / CETP family, C-terminal domain 279 477 IPR001124 GO:0008289
Ahy17g0330 493 SMART bpi1_3 34 259 IPR017942 GO:0008289
Ahy17g0330 493 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 28 243 IPR017943 GO:0008289
Ahy17g0330 493 PANTHER OS06G0309200 PROTEIN 1 487 IPR045897 -
Ahy17g0330 493 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 244 479 IPR017943 GO:0008289
Ahy17g0330 493 SMART bpi2_2 277 475 IPR001124 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0330 Ahy-Chr17 3024850 3027775 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0330 K05399 - gmx:100804747 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0330 17 3024850 3027775 Ahy17g0330 17 3024850 3027775 ECH
Ahy17g0330 17 3024850 3027775 Ahy7g0218 7 1689991 1692959 hybridization
Ahy17g0330 17 3024850 3027775 Ahy17g0330 17 3024850 3027775 PCT
Ahy17g0330 17 3024850 3027775 Ahy7g0218 7 1689991 1692959 PCT
Ahy7g0218 7 1689991 1692959 Ahy17g0330 17 3024850 3027775 PCT