Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0322 ATGTCAAAATTTGAGGGTGTTATTGTCTCCGATCAATGGCTTCAGAGTCAGTTTACACAGGTCGAACTTCGCACCCTGAAATCAAAGTTTGTCTCCTTGAAGAATCAGAATGGTAAAGTTACATTTAGAGATTTACCATCTTTAGTGGTGAAGCTAAAGGCATTCGCAGATATGTATAGTGAAGACGAGATTAAGGCGATCTTGTGTGAATCCGACACTGACTTGACTAATGATGTTGATTTCGAATCCTTCTTAAGGGTATATTTGAATTTGCAAAGTCAAGCTACGGCGAAACAAGGTGGCAGGAGGCATTCATCGTCATTCCTTAAGGAAAGTATAACTACCCTTCTTCACACAATTAGTGAATCGGAAAAAGGCTGTTATGTTGCTCACATAAACAGCTACCTTGGTGATGATCCATTTTTGGAGCAATATCTTCCATTGGACCCGGCTACTAATGATCTATTCGATCTTGCAAAAGACGGCGTTCTTCTATGTAAGCTTATAAATGTTGCTGTGCCTGGGACTATAGATGAGCGAGCCATCAACACGAAACGAAAATTAAGTCTTTGGGAGAGAAATGAGAACCATACTCTATGCCTCAATTCTGCAAAGGCTATTGGCTGCACAGTGGTCAACATTGGCACCCAGGATTTAGTGGAAGGACGACCTCATCTTGTTCTTGGGTTGATTTCCCAAATCATAAAGATCCAGCTTTTGGCTGATCTGAACCTCAAGAAGACACCTCAGCTTGTAGAATTGGTTGATGATAGCCAGGAGATTGAAGAGCTTCTTAGTTTGTCACCTGAAAAGGTCCTGCTGAAGTGGATGAATTTTCATCTCCAGAGAGGAGGTTACCATAAAACTGTGAAGAATTTTTCTTCGGATGTTAAGGATGGAGAAGCTTATGCTTATCTTCTTAATGTTCTTGCACCTGAACATGGCAGTAGATCCACCTTGGATACCAAGGATACCAATGAAAGGGCAAATATGGTCCTCGAACATGCAGAGAAAATTGGCTGCAAACGATACTTGTCCCCGAAGGACATTGAAGAGGGATCCTCAAATCTGAATCTTGCATTTGTTGCGCAACTGTTTCATCATAGGAGTGGCCTATCTACAGACATTAAAAAGATGTCATATGCTAAGATGATGACAATGGATGATGTACAAACATCTAGAGAAGAGAGATGCTTCCGGCTATGGATAAATAGTCTTGGCATAGCTACTCACATAAATAGTCTATTTGAAGATGTCCGAAATGGATGGGTACTTTTGGAAGTTCTAGACAAGATATTTCCAGGAACAGTAAACTGGAAACATGCAACAAAACCTCCAATTAAGATGCCATTCAGAAAAGTAGAAAACTGCAATCAGGTCATTAAAATTGCTAAACAACTGCGATTCTCGCTTGTCAATGTAGCCGGAAATGACATCGTGCAAGGAAATAAGAAGCTCATTCTTGCTTTATTGTGGCAGTTGATGAGATTCACAATGCTTCAACTGTTAAAAAATTTGAGATCTCACTCACAAGGCAAGGAGATCACTGATGCCGATATTCTTAAATGGACAAACAGAAAAGTGAAGAGCACTGGCAGAACTTCCCAGATTGATAGCTTCAAGGACAAGAGTTTGTCAAGTGGAATATTTTTCCTTGAGCTTCTCAGTGCTGTAGAGCCTAGGGTTGTTAACTGGAACCTGGTCACCAAGGGTGAAAGCGATGACGAGAAGAAACTGAACGCCACCTATATAATCAGTGTAGCGAGAAAACTTGGTTGTTCAATCTTTTTGTTACCGGAGGATATTATGGAGGTTAATCAGAAGATGATTCTCACTCTCGCAGCCAGTATAATGTATTGGAGCTTGCAACAACAAGGTGAAGATGCACTGGATTCATTTCCTTCGCCTGCTGGTACTGCTACGACCACCACGCCGGAAGCTTCCCCAGCTCCATCGGTTTGCGGCGAAGACGAGAGTTCTTCCCTTGGTGGTGAACTCTCCAACTTGAGTGTTGATGATGCCACATCTGACACAACAGTGTCCTCACAACTTGAGTCTGATGAGCTATGA 2070 0.4174 MSKFEGVIVSDQWLQSQFTQVELRTLKSKFVSLKNQNGKVTFRDLPSLVVKLKAFADMYSEDEIKAILCESDTDLTNDVDFESFLRVYLNLQSQATAKQGGRRHSSSFLKESITTLLHTISESEKGCYVAHINSYLGDDPFLEQYLPLDPATNDLFDLAKDGVLLCKLINVAVPGTIDERAINTKRKLSLWERNENHTLCLNSAKAIGCTVVNIGTQDLVEGRPHLVLGLISQIIKIQLLADLNLKKTPQLVELVDDSQEIEELLSLSPEKVLLKWMNFHLQRGGYHKTVKNFSSDVKDGEAYAYLLNVLAPEHGSRSTLDTKDTNERANMVLEHAEKIGCKRYLSPKDIEEGSSNLNLAFVAQLFHHRSGLSTDIKKMSYAKMMTMDDVQTSREERCFRLWINSLGIATHINSLFEDVRNGWVLLEVLDKIFPGTVNWKHATKPPIKMPFRKVENCNQVIKIAKQLRFSLVNVAGNDIVQGNKKLILALLWQLMRFTMLQLLKNLRSHSQGKEITDADILKWTNRKVKSTGRTSQIDSFKDKSLSSGIFFLELLSAVEPRVVNWNLVTKGESDDEKKLNATYIISVARKLGCSIFLLPEDIMEVNQKMILTLAASIMYWSLQQQGEDALDSFPSPAGTATTTTPEASPAPSVCGEDESSSLGGELSNLSVDDATSDTTVSSQLESDEL* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0322 689 MobiDBLite consensus disorder prediction 661 683 - -
Ahy17g0322 689 ProSitePatterns Actinin-type actin-binding domain signature 2. 211 235 IPR001589 -
Ahy17g0322 689 ProSiteProfiles Calponin homology (CH) domain profile. 393 499 IPR001715 GO:0005515
Ahy17g0322 689 Gene3D - 245 373 IPR036872 -
Ahy17g0322 689 Gene3D - 118 244 IPR036872 -
Ahy17g0322 689 PANTHER FIMBRIN-1 3 684 - -
Ahy17g0322 689 SUPERFAMILY Calponin-homology domain, CH-domain 121 619 IPR036872 -
Ahy17g0322 689 SMART ch_5 124 237 IPR001715 GO:0005515
Ahy17g0322 689 SMART ch_5 516 620 IPR001715 GO:0005515
Ahy17g0322 689 SMART ch_5 269 368 IPR001715 GO:0005515
Ahy17g0322 689 SMART ch_5 395 497 IPR001715 GO:0005515
Ahy17g0322 689 CDD CH 149 237 IPR001715 GO:0005515
Ahy17g0322 689 Gene3D - 507 619 IPR036872 -
Ahy17g0322 689 MobiDBLite consensus disorder prediction 630 689 - -
Ahy17g0322 689 CDD CH 268 368 IPR001715 GO:0005515
Ahy17g0322 689 CDD CH 394 496 IPR001715 GO:0005515
Ahy17g0322 689 ProSiteProfiles Calponin homology (CH) domain profile. 122 239 IPR001715 GO:0005515
Ahy17g0322 689 ProSiteProfiles Calponin homology (CH) domain profile. 514 622 IPR001715 GO:0005515
Ahy17g0322 689 Gene3D - 389 506 IPR036872 -
Ahy17g0322 689 MobiDBLite consensus disorder prediction 630 649 - -
Ahy17g0322 689 PANTHER FIMBRIN/PLASTIN 3 684 IPR039959 GO:0051015|GO:0051017
Ahy17g0322 689 SUPERFAMILY EF-hand 12 94 IPR011992 -
Ahy17g0322 689 ProSiteProfiles Calponin homology (CH) domain profile. 267 370 IPR001715 GO:0005515
Ahy17g0322 689 ProSitePatterns Actinin-type actin-binding domain signature 2. 471 495 IPR001589 -
Ahy17g0322 689 Gene3D - 7 102 - -
Ahy17g0322 689 Pfam Calponin homology (CH) domain 268 369 IPR001715 GO:0005515
Ahy17g0322 689 Pfam Calponin homology (CH) domain 395 497 IPR001715 GO:0005515
Ahy17g0322 689 Pfam Calponin homology (CH) domain 517 618 IPR001715 GO:0005515
Ahy17g0322 689 Pfam Calponin homology (CH) domain 151 237 IPR001715 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0322 Ahy-Chr17 2992271 2997407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0322 1 689 EF-hand Containing Proteins AT5G55400 69.886 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0322 K17275 - gmx:100794850 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0322 17 2992271 2997407 Ahy17g0322 17 2992271 2997407 ECH
Ahy17g0322 17 2992271 2997407 Ahy7g0210 7 1658593 1663752 hybridization