Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0318 ATGGCGACGGCGGATCCTCCGAAGGCCGATTCCGGCGACACCACCACTCAGCCACAGCTTCCGATTCAGCCTCAGCCTTCCAATACTGTATCTATTCCCAACCGTTCCGACGCACTTGTCCCTGCTGCCCCCGCCGTTTGTCTCCTCCGCTTTGTCGGAGACTCCGCCGGCGGTGCTTTTATGGGCTCCCTGTTCGGATACGGTGCTGGGTTGTTTAAGAAGAAAGGTTTTAAAGGATCCTTTGTAGAAGCAGGGTCTTATGCTAAGACGTTTGCTGTTTTGTCTGGAGTTCATAGTTTGGTTGTTTGCATCTTGAAAAGACTTCGAGGAAAGGATGATGTTATTAATGCTGGAGTAGCTGGATGTTGTACTGGCCTTGCACTAAGCTTTCCAGGTGCGCCACAAGCTCTCTTGCAGAGCTGCCTCACTTTTGGGGCTTTTTCCTTTATTATGGAAGGGCTAAACAAGCAGCAACCAGCACTTGCGGTTCCAATCTCCCGGAAAACAAGTTTGCAACACAATACACGCCCACCCCTCGTACTCCCCCTTCAGTTCCCTCTTCCAGATGAAATGAAAGGTGCTTTTTCCTTTTTCTGCGAGTCACTGAAGAAGCGCAACAAGGGAGCTCATGGTACTTGGCAATAA 645 0.5039 MATADPPKADSGDTTTQPQLPIQPQPSNTVSIPNRSDALVPAAPAVCLLRFVGDSAGGAFMGSLFGYGAGLFKKKGFKGSFVEAGSYAKTFAVLSGVHSLVVCILKRLRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFIMEGLNKQQPALAVPISRKTSLQHNTRPPLVLPLQFPLPDEMKGAFSFFCESLKKRNKGAHGTWQ* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0318 214 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 148 - -
Ahy17g0318 214 MobiDBLite consensus disorder prediction 9 28 - -
Ahy17g0318 214 MobiDBLite consensus disorder prediction 1 28 - -
Ahy17g0318 214 PANTHER CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22-2-RELATED 15 194 - -
Ahy17g0318 214 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 15 194 IPR039175 GO:0042721|GO:0045039
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0318 Ahy-Chr17 2958341 2960446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0318 34 207 Miscellaneous Gene Families AT4G26670 71.186 4.70e-83 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0318 K17790 - gmx:100813557 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0318 17 2958341 2960446 Ahy17g0318 17 2958341 2960446 ECH
Ahy17g0318 17 2958341 2960446 Ahy7g0206 7 1617606 1619750 hybridization