Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0316 ATGGAGTCCCCACAATCTGTTGTGTCACCATTGAAGAAATCTGTGTTGGTTGATAATGAGAAGCAAAAACATGATGTTTCCTTGTCCAAGGACATTGAAGTCAATGGAACAAAGGATGATTTCATGGGTGTTGTTGATGTTTACATCCATGAGGCCAGGGACATTCATAACATCTGCATATACCACAAGCAAGATGTTTATGCCAAAATTTGTTTGACAAGTGATCCTGATAACTCTGTCTCAACCAAGATCATCAATGGTGGAGGAAACAACCCTGTGTTCAATGAGAATCTAAGTCTAAGTGTTAGGACTGTTGATTCGGCTGTGAAATGTGAGATTTGGATGCTGAGCCGGGTCAGGAACTATCTAGAAGACCAGTTGCTTGGTTTTGCTTTGGTGCCTCTTTCTGAAGTTCTGGTGAATAAGGATTGCAAGCTTGAGAAAGAGTTCTCGCTTTCTTCCACCGATCTTTTCCATTCTCCGGCCGGCTTTGTTCAGCTTTCACTTGCCTACTCCGGTGCTTCCCCTGATGTTATGGCAATATCCTCAATGCCTTTGAAATTGGCTGCAAATGAGATTGACAAGGACTCAGAACCGTGCAGCGAGTCGTTGGTGGAAGATTTAGACAAGATTGAGTTCCCTGATCCGAAAATAGCCAAGGAAGATTGCTTGATGGTTTCGGAATACATAAGCATTCAATGTTCTGAGGATGCTGAAAACCATAGCAGTGTTGAATCAATGCAACCTCCACCTCCTCCTAAGGTTGATTCTCCACCAAGCAGTGTATCAACAAATGGAATCTCGTCTCCTTCGGTGGCTGCAAGCTCAGAATCCTCTGCTGCTAAGGAAGAGAAGAAAACTATGGATGTCAAAAATGGTGATAGTGATTCCTCGAGTAGGGAAGCATTCGCGAAACCTCTTGTGAGTTTGAAAATTGAGCCAGAGCCAGAGCCAAGCATGGTGCAGCAGGACATAGTAGACATGTATATGAAAAGTATGCAGCAATTCACCGAGTCGTTGGCGAAAATGAAGCTTCCTAATATGGACAGTGAGAAGGGAGTAGGTAGCTCAGGTAACTCCGGCAGCTCCGAGCAGAAGCTTCAGGCGTCAAGGAGTGGTAATTCGCGCGTGTTCTATGGTAGTAGAGCTTTCTTCTGA 1158 0.4439 MESPQSVVSPLKKSVLVDNEKQKHDVSLSKDIEVNGTKDDFMGVVDVYIHEARDIHNICIYHKQDVYAKICLTSDPDNSVSTKIINGGGNNPVFNENLSLSVRTVDSAVKCEIWMLSRVRNYLEDQLLGFALVPLSEVLVNKDCKLEKEFSLSSTDLFHSPAGFVQLSLAYSGASPDVMAISSMPLKLAANEIDKDSEPCSESLVEDLDKIEFPDPKIAKEDCLMVSEYISIQCSEDAENHSSVESMQPPPPPKVDSPPSSVSTNGISSPSVAASSESSAAKEEKKTMDVKNGDSDSSSREAFAKPLVSLKIEPEPEPSMVQQDIVDMYMKSMQQFTESLAKMKLPNMDSEKGVGSSGNSGSSEQKLQASRSGNSRVFYGSRAFF* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0316 385 PANTHER EXPRESSED PROTEIN 242 385 - -
Ahy17g0316 385 PANTHER EXPRESSED PROTEIN 1 238 - -
Ahy17g0316 385 SMART C2_3c 44 147 IPR000008 -
Ahy17g0316 385 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 173 IPR035892 -
Ahy17g0316 385 MobiDBLite consensus disorder prediction 279 298 - -
Ahy17g0316 385 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 238 - -
Ahy17g0316 385 ProSiteProfiles C2 domain profile. 20 150 IPR000008 -
Ahy17g0316 385 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 242 385 - -
Ahy17g0316 385 MobiDBLite consensus disorder prediction 259 278 - -
Ahy17g0316 385 MobiDBLite consensus disorder prediction 342 373 - -
Ahy17g0316 385 MobiDBLite consensus disorder prediction 237 318 - -
Ahy17g0316 385 Pfam C2 domain 44 143 IPR000008 -
Ahy17g0316 385 Gene3D C2 domain 36 182 IPR035892 -
Ahy17g0316 385 MobiDBLite consensus disorder prediction 352 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0316 Ahy-Chr17 2939440 2942017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0316 - - gmx:100781587 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0316 17 2939440 2942017 Ahy17g0316 17 2939440 2942017 ECH
Ahy17g0316 17 2939440 2942017 Ahy7g0204 7 1602044 1604614 hybridization
Ahy17g0316 17 2939440 2942017 Ahy17g0316 17 2939440 2942017 PCT
Ahy17g0316 17 2939440 2942017 Ahy7g0204 7 1602044 1604614 PCT
Ahy7g0204 7 1602044 1604614 Ahy17g0316 17 2939440 2942017 PCT