Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0245 ATGGTGCTCATGGCAGGACGCTCCCTCACTTCCTTTGTCAACCCAACACCAACCCAATTCTCTCTTCTTTTTCTTCTCAATCCAAAGTTCTTAACTTGCCACACCCCTTTTTCTCCTCTCACTCCTCTTCCTTCACCTAAAACCTTGCCTTCTAAGTCTTCTGCTTCTTTTTCTGCTTCAATTGATGCTTCAAGTTCAACGTTGACCAAAAATAACTCAAGGGGTTTCTCCAGAATCTTCAGAAACAATTTCACTGATGGTGTTTGCAAGTACCAGGTGAAAACTCTTCAGACTACCCCTACTTTTGTTGAGGAAGTTCAAGAAAATGAAGCTGTGGATCTATGGCCGAAGATGAAGGAAGAGGCTGAACTTGATGTAACTGAGGAACCTATTCTGAATAGTTACTACCAATCTTCAATTCTGTCTCATGATTCATTGGAATCTGCTTTGGCCAATCACCTTGCTAACAGATTAAGCAGTGCAAGCCTTCCAAGTAACACACTCTTTGATCTTTTTGTTGGGATCTTGAAATCTGACCAAGAAATCATGGATTCTGTGAAGGAAGATCTCAAAGCAGTTAACGAAAGAGACCCTGCTTGCATAAGCCATGTGCATTGCTTCTTGAACTTCAAAGGCTTCTTAGCATGCCAATCTCATAGAGTTGCTCATAAGCTATGGCTTCAAGGAAGAAAAGTCTTGGCAGTTATGATCCAGAACCGAGTTTCCGAGGTTTTCGCAGTAGATATTCATCCCGGTGCTAAGATTGGAAGTGGGATTCTGCTTGATCATGCAACTGGATTAGTGGTTGGTGAAACTGCAGTGATTGGTAACAATGTGTCAATTTTGCATAGTGTGACTTTGGGTGGAACTGGTAAAGCTTCTGGTGATAGGCATCCAAAGATTGGTGATGGGGTTTTGATTGGTGCAGGGACTTGTATTTTGGGGAACATTAAGGTTGGTGAATGTGCTAAGATTGGTGCTGGTTCTGTGGTGATTAAGGATGTTCCTCCTAGGACTACTGTTGTTGGGAATCCTGCTAAATTGATTGGAGGCAAGAACAACCCTGTTAAGCTGGACAAGATGCCTAGCTTCACCATGGATCATACTTCAAATATTACTGAATTTTATGATTACTGTATTTAG 1143 0.4182 MVLMAGRSLTSFVNPTPTQFSLLFLLNPKFLTCHTPFSPLTPLPSPKTLPSKSSASFSASIDASSSTLTKNNSRGFSRIFRNNFTDGVCKYQVKTLQTTPTFVEEVQENEAVDLWPKMKEEAELDVTEEPILNSYYQSSILSHDSLESALANHLANRLSSASLPSNTLFDLFVGILKSDQEIMDSVKEDLKAVNERDPACISHVHCFLNFKGFLACQSHRVAHKLWLQGRKVLAVMIQNRVSEVFAVDIHPGAKIGSGILLDHATGLVVGETAVIGNNVSILHSVTLGGTGKASGDRHPKIGDGVLIGAGTCILGNIKVGECAKIGAGSVVIKDVPPRTTVVGNPAKLIGGKNNPVKLDKMPSFTMDHTSNITEFYDYCI* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0245 380 Pfam Serine acetyltransferase, N-terminal 114 218 IPR010493 GO:0005737|GO:0006535|GO:0009001
Ahy17g0245 380 PANTHER SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC 71 380 - -
Ahy17g0245 380 SUPERFAMILY Trimeric LpxA-like enzymes 114 350 IPR011004 -
Ahy17g0245 380 SMART SATase_N_2_a 114 218 IPR010493 GO:0005737|GO:0006535|GO:0009001
Ahy17g0245 380 Coils Coil 176 196 - -
Ahy17g0245 380 PANTHER SERINE ACETYLTRANSFERASE 71 380 - -
Ahy17g0245 380 CDD LbH_SAT 245 345 IPR045304 -
Ahy17g0245 380 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 307 335 IPR018357 GO:0016740
Ahy17g0245 380 TIGRFAM cysE: serine O-acetyltransferase 186 347 IPR005881 GO:0005737|GO:0006535|GO:0009001
Ahy17g0245 380 Gene3D Hexapeptide repeat proteins 248 372 - -
Ahy17g0245 380 Gene3D serine acetyltransferase, domain 1 98 247 IPR042122 -
Ahy17g0245 380 Pfam Bacterial transferase hexapeptide (six repeats) 298 332 IPR001451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0245 Ahy-Chr17 2316753 2318558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0245 114 379 Miscellaneous Gene Families AT2G17640 53.383 5.25e-94 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0245 K00640 - ahf:112705240 498.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0245 17 2316753 2318558 Ahy17g0245 17 2316753 2318558 ECH
Ahy17g0245 17 2316753 2318558 Ahy7g0141 7 1000995 1002813 hybridization
Ahy17g0245 17 2316753 2318558 Ahy17g0245 17 2316753 2318558 PCT
Ahy17g0245 17 2316753 2318558 Ahy7g0141 7 1000995 1002813 PCT
Ahy7g0141 7 1000995 1002813 Ahy17g0245 17 2316753 2318558 PCT