Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0240 ATGGAGGGAAAGTGGATGAGTTCCCAATCACAGTCACCGAACTTCCACTTACTCGCCAAGATCAAAGAGTTCACTCTATCTATCGTCACTGACCTGAGCAACGGTCAATCGCCGGTAATCCTCATCCACCGGTTCAGGAATCACTGCACTAATCCCAATTCCAATTGCTTTTGTGGCTCCAATCTACCATGCGGGAAGGATGTTCTCACTCTCTGCAGGGAATCGCACGTACACAGAATAGATGTGATGTTGAGAGTGCTACTCATTGTTCAGAAACTTTTGCAAGAGAACAGGCATTGTTCCAAGAGGGATATTTATTACATGCATCCTTCTGTGTTTTCAGATCAGTCAGTTGTAGACCATGCAATTAATGATATATGTGTCCTTATGCAGTGCAGTCGCCATAACCTTAATGTGGTTTCTGCTGGGAAGGGGTTAGTTATGGGATGGATAAGATTCTTTGAAGGAAAAAGGCTGTTTGACTGCATCAGTTCTCCGAACAAGGTCCACCCTATTCCTGTTCATGTTGAAGAAGTTAAAGATATCATTAGTGTTGCTCACTACATATTAGTCGTTGAGAAAGAATCAGTTTTCGAAAGACTAGCAAATGACCAGTTCTGCAGTGCAAACCACTGCATTGTGATCACTGGAAGAGGCTACCCGGATATTCCTACAAGAAGGTTTCTGCGTCTTCTAGTTGAGGATTTGCACCTGCCTGCATATTGCTTGGTTGATTGTGATCCCTATGGCTTTGACATCTTAACCACTTACAGATTTGGTTCCATGCAAATGGCTTATGACACAAAACATCTTCGTGTCCCGGAGATACAATGGCTTGGAGCTTATCCTTCAGATGCTGAGAGATATTTTATTCCAAAGCAGTGTCTACTTTCTCTAACTGCTGAAGACAAGAGGAAACTTGAAGCCATGTTGCTTAGATGCTACCTGCAAAGGGATGTGCCACAATGGAGGTTGGAGCTAAAGATGATGCTGGAGAAAGGAGTGAAGTTTGAGATTGAAGCATTATCTGTGCATGCTCTTTCATTCTTGTCAGTGTCTTACCTGCCATCTAAAATTCAAGGTAAAATGATCATTTAG 1098 0.4271 MEGKWMSSQSQSPNFHLLAKIKEFTLSIVTDLSNGQSPVILIHRFRNHCTNPNSNCFCGSNLPCGKDVLTLCRESHVHRIDVMLRVLLIVQKLLQENRHCSKRDIYYMHPSVFSDQSVVDHAINDICVLMQCSRHNLNVVSAGKGLVMGWIRFFEGKRLFDCISSPNKVHPIPVHVEEVKDIISVAHYILVVEKESVFERLANDQFCSANHCIVITGRGYPDIPTRRFLRLLVEDLHLPAYCLVDCDPYGFDILTTYRFGSMQMAYDTKHLRVPEIQWLGAYPSDAERYFIPKQCLLSLTAEDKRKLEAMLLRCYLQRDVPQWRLELKMMLEKGVKFEIEALSVHALSFLSVSYLPSKIQGKMII* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0240 365 Gene3D - 143 365 - -
Ahy17g0240 365 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11 10 362 IPR002815 GO:0003677|GO:0003918|GO:0005694
Ahy17g0240 365 PANTHER MEIOTIC RECOMBINATION PROTEIN SPO11-1 10 362 - -
Ahy17g0240 365 PRINTS SPO11 homologue signature 285 309 IPR013048 GO:0003677|GO:0003918|GO:0042138
Ahy17g0240 365 PRINTS SPO11 homologue signature 250 269 IPR013048 GO:0003677|GO:0003918|GO:0042138
Ahy17g0240 365 PRINTS SPO11 homologue signature 346 365 IPR013048 GO:0003677|GO:0003918|GO:0042138
Ahy17g0240 365 PRINTS SPO11 homologue signature 203 218 IPR013048 GO:0003677|GO:0003918|GO:0042138
Ahy17g0240 365 PRINTS SPO11 homologue signature 108 128 IPR013048 GO:0003677|GO:0003918|GO:0042138
Ahy17g0240 365 Pfam Type IIB DNA topoisomerase 79 139 IPR013049 GO:0003677|GO:0003824|GO:0005524|GO:0005694|GO:0006259
Ahy17g0240 365 PRINTS DNA topoisomerase VI subunit A family signature 102 113 IPR002815 GO:0003677|GO:0003918|GO:0005694
Ahy17g0240 365 PRINTS DNA topoisomerase VI subunit A family signature 116 133 IPR002815 GO:0003677|GO:0003918|GO:0005694
Ahy17g0240 365 PRINTS DNA topoisomerase VI subunit A family signature 134 149 IPR002815 GO:0003677|GO:0003918|GO:0005694
Ahy17g0240 365 PRINTS DNA topoisomerase VI subunit A family signature 245 261 IPR002815 GO:0003677|GO:0003918|GO:0005694
Ahy17g0240 365 PRINTS DNA topoisomerase VI subunit A family signature 189 206 IPR002815 GO:0003677|GO:0003918|GO:0005694
Ahy17g0240 365 PRINTS DNA topoisomerase VI subunit A family signature 213 234 IPR002815 GO:0003677|GO:0003918|GO:0005694
Ahy17g0240 365 SUPERFAMILY DNA topoisomerase IV, alpha subunit 77 361 IPR036078 GO:0003677|GO:0005694
Ahy17g0240 365 CDD TOPRIM_TopoIIB_SPO 187 349 IPR034136 -
Ahy17g0240 365 Gene3D - 3 142 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0240 Ahy-Chr17 2280298 2283852 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0240 K10878 - gmx:100813920 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0240 17 2280298 2283852 Ahy17g0240 17 2280298 2283852 ECH
Ahy17g0240 17 2280298 2283852 Ahy7g0136 7 968455 972167 hybridization