Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0238 ATGGCGCGTGTTGGAGGCACAAGCGCCGTTGGCTTCGGTGGCGCCATTTTGGTGTGCGTAGCTTTTGCCTACTTCATCTCCGACCGTCGTTGGAAGAAGAAGAAACCGATAATGAAGAAAACCAGAGGAGGAGTGGTTGATGCCATTGGCAACACTCCTTTGATTCGAATCAACAGCCTCTCCGATGCTACTAACTGCCAAATTCTTGCCAAGTGCGAGTTCCTTAACCCTGGTGGCAGCGTCAAAGATCGTGTTGCTCTTCAAATTATCCAAGAGGCCTTGGAATCTGGCCAGCTAAGTCCAGGTGGAATAATCACTGAAGGGAGTGCTGGTAGCACTGCCATTAGCATCGCCACGGTTGCTCCTGCATTTGGATGCCAATGCCACGTTGTTATACCCGATGATGCTGCCATTGAGAAGTCTCAAATAATTGAAGCCCTTGGGGCAACTGTTGAAAGAGTAAGACCAGTGTCAATTACTCACAAAGATCATTTTGTCAATATTGCAAGGAGAAGGGCATCTGAAGCAAATGAGTTCGCATCAAAGCTCAGAAATTCACAATTGAATGGCAAGGACACATACCAGATAAACGGTCACAAATCCAATGGTTATGATCACAGTTCACTCTTTCCTACTGATTGTAAAGGTGGATTTTTTGCGGATCAGTTTGAGAATTTGGCGAACTTCAGAGCCCATTATGAGGGTACAGGGCCTGAGATTTGGGAACAAACCAATGGAAATTTGGATGCATTTGTTGCAGCAGCAGGCACTGGTGGCACTGTGGCTGGTATTAGCAGTTTTCTTCAGGAAAAGAATCCAGGGATCAAGTGCTTCCTTATAGATCCTCCTGGTTCCGGTTTGTATAATAAGGTAACGAGGGGAGTTATGTATACAAAAGAGGAGGCAGAAGGACGAAGACTTAAGAATCCATTTGACACCATAACAGAAGGAATCGGAATTAACAGGATAACAAGGAATTTTGCAAAGGCAAAGCTTGATGGCGCTTTTCGAGGCACAGATCTTGAGGCTGTTGAAATGGCTAGGTTCCTCTTGAAGAATGATGGGCTCTTCTTAGGAAGCTCTTCAGCAATGAATTGTGTAGGAGCAGTTAGAGTAGCGCAGGCATTGGGCCCTGGTCACACAATTGTGACAATCCTCTGTGACAGTGGAATGCGACACCTGAGCAAGTTCCACAACGACAAATACTTGTCTCAGCTCGGATTGATGCCAAAAGCAACTGGATTGGAGTTCTTGGGCATCAAATGA 1266 0.4589 MARVGGTSAVGFGGAILVCVAFAYFISDRRWKKKKPIMKKTRGGVVDAIGNTPLIRINSLSDATNCQILAKCEFLNPGGSVKDRVALQIIQEALESGQLSPGGIITEGSAGSTAISIATVAPAFGCQCHVVIPDDAAIEKSQIIEALGATVERVRPVSITHKDHFVNIARRRASEANEFASKLRNSQLNGKDTYQINGHKSNGYDHSSLFPTDCKGGFFADQFENLANFRAHYEGTGPEIWEQTNGNLDAFVAAAGTGGTVAGISSFLQEKNPGIKCFLIDPPGSGLYNKVTRGVMYTKEEAEGRRLKNPFDTITEGIGINRITRNFAKAKLDGAFRGTDLEAVEMARFLLKNDGLFLGSSSAMNCVGAVRVAQALGPGHTIVTILCDSGMRHLSKFHNDKYLSQLGLMPKATGLEFLGIK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0238 421 Gene3D - 83 224 IPR036052 -
Ahy17g0238 421 Pfam Pyridoxal-phosphate dependent enzyme 47 388 IPR001926 -
Ahy17g0238 421 PANTHER CYSTEINE SYNTHASE-RELATED 33 420 - -
Ahy17g0238 421 Gene3D - 48 395 IPR036052 -
Ahy17g0238 421 PANTHER CYSTATHIONINE BETA-SYNTHASE 33 420 - -
Ahy17g0238 421 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 40 401 IPR036052 -
Ahy17g0238 421 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 71 89 IPR001216 GO:0006535
Ahy17g0238 421 CDD CBS_like 50 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0238 Ahy-Chr17 2264527 2267016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0238 49 395 Miscellaneous Gene Families AT3G04940 29.799 8.84e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0238 K01738 - gmx:100799081 677.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0238 17 2264527 2267016 Ahy17g0238 17 2264527 2267016 ECH
Ahy17g0238 17 2264527 2267016 Ahy7g0134 7 955967 958578 hybridization