Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0232 ATGGCCAGCTCCACGTTCCTCCTCTCTCCTCTCACTTTCTCACACAACAAAAAACCACTTCTTCATTATTCCTTCCTTCATTCCTCCACAAAAAATCTAAACTTGCTGCTTCCAAAGGGTTTCATCAGAAAAACCAATGAACTCAGAACCCTCACAGTGGCCAAATCCAACGGTAGTGATTCAGCAGATGCTCCTGACCGTTTGATCTCTGCACTCTGCTACTTCTACCCTTTCTTTGATGGGGTTCAGTATGGTAAATATGTCATCAATCAGTTCTATCCTGTTCAAGCCATTGTTCAACCCTTGTTCCCTGCTATTAGGGTTTTCAAAAGCTTCCCCTTTAATGGGTTCCTTGTATTTTTGACACTTTACTTTGTTGTTGTGAGGAACCAAAATTTCAGTAGGTATGTGAGGTTCAACACAATGCAAGCCATTGTTCTTGATGTGCTCTTGATTTTCCCTGATCTTTTGGAGAGGACTTTCAATCCAAGGAGTGGTTTTGGTTTGGATTTGATGATGAGCTTGGATAGTACTGTGTTCTTGTTCCTCTTGGTGTCTTTGATCTATGGCTCTTCTTCCTGCTTGTTGGGTCAAATTCCAAGATTGCCCATTGTTGCTGATGCTGCTGATAGGCAAGTTCTATGA 645 0.4202 MASSTFLLSPLTFSHNKKPLLHYSFLHSSTKNLNLLLPKGFIRKTNELRTLTVAKSNGSDSADAPDRLISALCYFYPFFDGVQYGKYVINQFYPVQAIVQPLFPAIRVFKSFPFNGFLVFLTLYFVVVRNQNFSRYVRFNTMQAIVLDVLLIFPDLLERTFNPRSGFGLDLMMSLDSTVFLFLLVSLIYGSSSCLLGQIPRLPIVADAADRQVL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0232 214 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 18 213 IPR005691 -
Ahy17g0232 214 Pfam Chloroplast import apparatus Tic20-like 67 209 IPR005691 -
Ahy17g0232 214 PANTHER PROTEIN TIC 20-V, CHLOROPLASTIC 18 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0232 Ahy-Chr17 2241046 2242061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0232 - - gmx:100777912 319.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0232 17 2241046 2242061 Ahy17g0232 17 2241046 2242061 ECH
Ahy17g0232 17 2241046 2242061 Ahy7g0129 7 927967 929040 hybridization