Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0229 ATGGATATTCCGTTGCCGGTGGATAAATTAGCTTTGATCAACAATGAACCCTCTCCAAACACAACCAACAGTAAGATATATGTTGTTCTTGTCGCTACTGGGAGCTTCAATCCACCTACCTTCATGCATTTGCGAATGTTCGAGCTTGCAAGAGATGCACTGAATTCAGAAGGTTACTGCGTAATTGGAGCTTACATGTCTCCTGTGAACGATGCATATAAGAAAAAGAACCTAATATCTGCTGAACATCGAATGCAATTATGTAATCTAGCATGCAAAAGTTCAGACTTTGTAATGGTTGATCCATGGGAGGCAAATCAAAGCACCTATCAACGCACTTTAACCGTGCTGTCCAGAGTCCACAGTTCAATATGTGGGAAAGGATTAATATCTAGAGGAACCCTCAAGGTCATGCTTGTCTGTGGTTCTGATCTGATTCATTCTTTTAGCATTCCAGGATTTTGGATTCCTGACCAGGTTAAGAGTATATGCAGAGATTACGGAATAGTCTGCATTCGCAGAGAAGGACAGGATGTTGAGAAGATTATATCCGATGATAAAATTTTGAAGGAGAATCAGGCTAATATCAAAGTTGTGCATGACCTTGTACCGAACCAAATCAGTTCAACGAGATTAAGGGACTGCATTGCAAGAGGATTATCAATAAAATACCTGACAGCAGATGAAGTGATTGATTATATCAGAGATCAGAAATTATACTTAACCTTGGATGATAAATAA 741 0.3927 MDIPLPVDKLALINNEPSPNTTNSKIYVVLVATGSFNPPTFMHLRMFELARDALNSEGYCVIGAYMSPVNDAYKKKNLISAEHRMQLCNLACKSSDFVMVDPWEANQSTYQRTLTVLSRVHSSICGKGLISRGTLKVMLVCGSDLIHSFSIPGFWIPDQVKSICRDYGIVCIRREGQDVEKIISDDKILKENQANIKVVHDLVPNQISSTRLRDCIARGLSIKYLTADEVIDYIRDQKLYLTLDDK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0229 246 TIGRFAM TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 32 240 IPR005248 GO:0009435|GO:0016779
Ahy17g0229 246 SUPERFAMILY Nucleotidylyl transferase 28 242 - -
Ahy17g0229 246 Pfam Cytidylyltransferase-like 31 213 IPR004821 GO:0003824|GO:0009058
Ahy17g0229 246 PANTHER NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE 20 243 - -
Ahy17g0229 246 CDD NMNAT_Eukarya 28 240 IPR045094 GO:0000309|GO:0004515|GO:0009435
Ahy17g0229 246 Gene3D HUPs 25 245 IPR014729 -
Ahy17g0229 246 PANTHER NICOTINAMIDE-NUCLEOTIDE ADENYLYLTRANSFERASE 20 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0229 Ahy-Chr17 2202270 2205491 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0229 K06210 - gmx:100793809 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0229 17 2202270 2205491 Ahy17g0229 17 2202270 2205491 ECH
Ahy17g0229 17 2202270 2205491 Ahy7g0125 7 880541 883834 hybridization