Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0225 ATGTCGGAAAAGGGTCAGCCACTACCTAAGTTTGGTGAATGGGATGTTAATGATCCAGCTTCAGCGGAAGGGTACACTGTAATCTTTAACAAAGCTAGGGATGAGAAGAAGACTGGTGGCAAACCTGAGTCACCCGGAAAAGCTGATCCTCATACTGCCAAGCCTGCATTAGATCCCGGCAAAACTGCGAGTAAGAAATGGTTTTGCTGCATACAAAATCCTCCTGCAGAATCATAG 237 0.4599 MSEKGQPLPKFGEWDVNDPASAEGYTVIFNKARDEKKTGGKPESPGKADPHTAKPALDPGKTASKKWFCCIQNPPAES* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0225 78 MobiDBLite consensus disorder prediction 30 48 - -
Ahy17g0225 78 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Ahy17g0225 78 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE SITE-RELATED 2 64 - -
Ahy17g0225 78 MobiDBLite consensus disorder prediction 30 65 - -
Ahy17g0225 78 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 2 64 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0225 Ahy-Chr17 2182045 2183924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0225 - - gmx:100305826 142.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0225 17 2182045 2183924 Ahy17g0225 17 2182045 2183924 ECH
Ahy17g0225 17 2182045 2183924 Ahy7g0121 7 860637 862520 hybridization
Ahy17g0225 17 2182045 2183924 Ahy17g0225 17 2182045 2183924 PCT
Ahy17g0225 17 2182045 2183924 Ahy7g0121 7 860637 862520 PCT
Ahy7g0121 7 860637 862520 Ahy17g0225 17 2182045 2183924 PCT