Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0214 ATGGATGCATGGAATGATGAAGCTATGAAGCAGTTTCAGTCCCTTCTGGAAACCTTGGATGAACAACACAAGAACACATTCCAGAATATGCACCAGGGTTATCCCAGAGAAACATTAGTACGTTTTCTCAAAGCAAGGGATGGGAATGTTCCCAAAGCACATAAAATGTTAATTGATTGCTTGCAATGGAGAGTGGAAAATGAGATTGACAATGTTTTAGCTAGGCCAATCCCGGCCGATTCGTACAGAAACGTGAGAGATTCGCAACTCATTGGAATGTCTGGTTACACAAAAGAGGGTCTACCAGTCATTGCTGTTGGTGTTGGTCTTAGCACATATGGCAAAGTTTCTGACAAATACTATGTACAATCTCACATCCAAATGAATGAATATAGGGATAGGGTGATCTTGCCAACAGCTACCAAGAATCATGGAAGATACATTGGTACCTGTGTGAAAGTCTTGGATATGACAGGCCTAAGACTATCAGCACTGAACCAAATGAAGCTTTTGACATCTATATCTACCATAGATGACTTGAATTATCCAGAAAAGACAGACACATACTATATTGTCAATGCTCCATATGTATTCTCTGCATGTTGGAAGGTTGTAAAGCCTCTTTTGCAAGAAAGAACAAGGAAGAAAGTTCAAGTGCTGCAAGGTTGTGGCAGGGAGGAATTACTTAAGGTAATGGACTATGCATCCCTTCCACATTTTTGCAAGGACTCATCAAAGTTAACCAAACACAATGCAACAATGAATGCTGAAAACTGCTACTCCCTTGATCATGTCTTCCATAAACAACTTTATAATTATATGAAGCAGCAAGCTATGATAATGGAGTCCATATCACAAATCAAACAGGATTCTTTCTATGTAGAATTGCCAGAGACAGACCCAGATGATGCCAGAATTGTCAAGACTATAGAAATTGAGTTCAGGAAAGTGGAAAGCAAGAATGGCCTAAATAATTCACTAAATGGTGTTACTGTTAAAGGTGTTTGA 1008 0.3919 MDAWNDEAMKQFQSLLETLDEQHKNTFQNMHQGYPRETLVRFLKARDGNVPKAHKMLIDCLQWRVENEIDNVLARPIPADSYRNVRDSQLIGMSGYTKEGLPVIAVGVGLSTYGKVSDKYYVQSHIQMNEYRDRVILPTATKNHGRYIGTCVKVLDMTGLRLSALNQMKLLTSISTIDDLNYPEKTDTYYIVNAPYVFSACWKVVKPLLQERTRKKVQVLQGCGREELLKVMDYASLPHFCKDSSKLTKHNATMNAENCYSLDHVFHKQLYNYMKQQAMIMESISQIKQDSFYVELPETDPDDARIVKTIEIEFRKVESKNGLNNSLNGVTVKGV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0214 335 PANTHER OS09G0258000 PROTEIN 3 334 - -
Ahy17g0214 335 CDD SEC14 82 240 IPR001251 -
Ahy17g0214 335 Coils Coil 5 25 - -
Ahy17g0214 335 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 78 249 IPR001251 -
Ahy17g0214 335 Gene3D - 1 290 IPR036865 -
Ahy17g0214 335 SUPERFAMILY CRAL/TRIO N-terminal domain 13 74 IPR036273 -
Ahy17g0214 335 Pfam CRAL/TRIO domain 89 240 IPR001251 -
Ahy17g0214 335 SUPERFAMILY CRAL/TRIO domain 80 241 IPR036865 -
Ahy17g0214 335 SMART CRAL_TRIO_N_2 35 60 IPR011074 -
Ahy17g0214 335 SMART sec14_4 85 246 IPR001251 -
Ahy17g0214 335 Pfam CRAL/TRIO, N-terminal domain 8 59 IPR011074 -
Ahy17g0214 335 PANTHER - 3 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0214 Ahy-Chr17 2053740 2057000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0214 1 328 Acyl Lipid Metabolism Gene Families AT5G47730 62.006 1.02e-151 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0214 - - gmx:100817955 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0214 17 2053740 2057000 Ahy17g0214 17 2053740 2057000 ECH
Ahy17g0214 17 2053740 2057000 Ahy7g0101 7 665835 669102 hybridization
Ahy17g0214 17 2053740 2057000 Ahy17g0214 17 2053740 2057000 PCT
Ahy7g0101 7 665835 669102 Ahy17g0214 17 2053740 2057000 PCT
Ahy17g0214 17 2053740 2057000 Ahy7g0101 7 665835 669102 PCT