Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0013 ATGGCGAAGCTTCAGAGCTTGTTCTCCATGAGGCACTTGTTGGTGCTCTCTCTCGCTCTCAATGTAAGCCTCATACTCAGAATAATCTATGATTCCCAACTTGATCTCTTCTTCTACAAATATCCTCATCAGGGGCAAATTAGTAATCTCCACACTCACAATAAACCTCGCTTGCTTATATCTTCTTCTTTCTCCAACTCTTCTTCTTCTTCTACTTGTGAGGATCATCATCAACCACCACCCAAAAACAACAACAGAGTCATCAATCTCGACCATGGAGACCCGAGAGTGTACGAAGCATTTTGGAGAGAAACGGGAGAGAAAACAACGATCAGAATTGCAGGGTGGCAATCAATGAGTTACTTCTCAGATGTGAGCAATGTTTGTTGGTTCCTAGAACCTGAGTTTGCAGAGGAGGTTGTGAGGCTCCACCGTGTGGTGGGAAATGCTGTCACAGAGGATCGTCACCTTGTTGTTGGAACGGGTTCCTCTCAGCTCTTTCTTGCTGCTCTCTATGCTCTCTCTCCAACTCATTCTCCTCAACCCATCAGTGTTGTCTCTGCTTCCCCCTACTACTCTTCATACCCATCAATGACGGATTACCAGAAATCAGGGCTATACAAATGGGGTGGTGATGCTGACAAGTTTGACAAAAGTGGGCCCTACATTGAGTTAGTTACTTCTCCCAACAACCCTGATGGCTGCGTCAGGCGTTCAGTGCTCAATCGCTCTGAGGGTCTACTGGTCCACGATCTTGCTTATTACTGGCCTCAGTACACTCCTATTTCTTCCCCTTCCAACCATGATCTTACCCTTTTCACTCTTTCTAAGACTACTGGTCATGCTGGAATGCGCATTGGGTGGGCTCTTGTGAAAGACAAAGAAGTAGCAAAGAAAATGACCAAATTCATAGAGCTCAATACCATAGGAGTCTCTAAGGACTCACAGCTTAGGGCCGCCAAGGTTCTGAGGGCAGTTTCCGACAGCTGCGAACTACAAGGCGGCGGCGAATCCTTCTTCCAGTTCAGCCACAAAATCATGTCAGACAGATGGAAACAACTCAGAGAAGCAGTTCAACGTAGTAATGGATTCTTCAGTGTCCCTACATTCTCTCCTTCTTTTTGCACCTTCTTTAATCAAAATTTGGAGCCTCATCCAGCATTTGTGTGGCTAAAATGTGAAAGAAATGTAGAAGACTGCGAAAGCTTTCTTAGAGGACACAACATATTAACAAGAAGTGGAACACACTTTGGAGTTAGCCAACAATATGTAAGAATTAGCATGTTGGATACAGATGAAAATTTTATGCACTTTCTACACAGACTCTCTACTATAAACTTTCGATAG 1347 0.4439 MAKLQSLFSMRHLLVLSLALNVSLILRIIYDSQLDLFFYKYPHQGQISNLHTHNKPRLLISSSFSNSSSSSTCEDHHQPPPKNNNRVINLDHGDPRVYEAFWRETGEKTTIRIAGWQSMSYFSDVSNVCWFLEPEFAEEVVRLHRVVGNAVTEDRHLVVGTGSSQLFLAALYALSPTHSPQPISVVSASPYYSSYPSMTDYQKSGLYKWGGDADKFDKSGPYIELVTSPNNPDGCVRRSVLNRSEGLLVHDLAYYWPQYTPISSPSNHDLTLFTLSKTTGHAGMRIGWALVKDKEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCELQGGGESFFQFSHKIMSDRWKQLREAVQRSNGFFSVPTFSPSFCTFFNQNLEPHPAFVWLKCERNVEDCESFLRGHNILTRSGTHFGVSQQYVRISMLDTDENFMHFLHRLSTINFR* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0013 448 MobiDBLite consensus disorder prediction 65 89 - -
Ahy17g0013 448 Gene3D - 53 128 IPR037029 GO:0016846
Ahy17g0013 448 MobiDBLite consensus disorder prediction 65 85 - -
Ahy17g0013 448 CDD AAT_like 134 442 - -
Ahy17g0013 448 Pfam Allinase 88 445 IPR006948 GO:0016846
Ahy17g0013 448 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 4 446 - -
Ahy17g0013 448 PANTHER TRYPTOPHAN AMINOTRANSFERASE-LIKE PROTEIN 4 446 - -
Ahy17g0013 448 Gene3D Aspartate Aminotransferase, domain 1 337 446 IPR015422 GO:0003824
Ahy17g0013 448 SUPERFAMILY PLP-dependent transferases 69 443 IPR015424 -
Ahy17g0013 448 Gene3D - 133 335 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0013 Ahy-Chr17 188074 198064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0013 K16903 - gmx:100807013 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1679 11 100898699 100912130 Ahy17g0013 17 188074 198064 PCT
Ahy17g0013 17 188074 198064 Ahy11g1679 11 100898699 100912130 PCT