Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0006 ATGAAAGGAACACTAAGATACTTGGCTGGAATTGCAGGGCCAAGTGGTTTTGGTTCAAATTCAACTGCTGAACAAGTCACTCATCAACAACATTCTTCTTCTTCTTCTTCCAATCTAACCGCTATTATAACTGGGGCAAGTTCTGGAATTGGAGCTGAAACAGCAAGAGTGTTAGCAAAGAGAGGAGTGAGAGTTGTAATTGCCGCAAGGGATACAAAGAAGGCTAAACAAGTCAAAGAGAAGATACAAAAAGAGATTCCAAATGCTAAGGTTGTGATTTTGGAAATTAATCTTAGCTCCTTTGCTTCTATACACTCATTTTGCTCCCACTTTATAGCTTTGGACCTTCCTCTTAATATTCTCATAAATAATGCTGGAATATTCTCTCAAAATCTTGAATTCTCTCAAGAGAAGATTGAAATGACATTTGCCACAAATTACATAGGACATTTTTTGTTGACCGAAATTCTATTAGAGAAAATGATAGAAACAGCAGAGAAGAGTGGCATTGAAGGAAGAATCATAAACGTTTCTTCTGTGATCCATAGCTGGGTGAAGAACAGAGATGCCTTTCATTTCAATGACATAATCAAAGGAACAAAGTATAATGGCACAAGGGCATATGCTCGGTCAAAATTGGCCAATATTCTACATGCAAAGGAAATAGCTAGGCAACTCAAGGCAAGGAATGCAAGAGTAACTATTAATGCAGTGCATCCAGGTATAGTTAAGACAGGAATTATTAGAGGTCATCAAGGCTTATTAACGGATTCAATATTTTTCATTGGATCAAAGTTACTTAAATCGACATCACAGGGTGCATCAACTACTTGTTATGTTGCTCTGAGCAAAAAAACAGAAGGTATAAGTGGAAAATACTTTGCAGATTGTAATGAGAGCAAGTGCTCAAGACTTGCAAATGATGAATTAGAAGCTCAAAAACTATGGAACCAAACCCATGCCTTGTTACATAATTATTTTTGA 984 0.3669 MKGTLRYLAGIAGPSGFGSNSTAEQVTHQQHSSSSSSNLTAIITGASSGIGAETARVLAKRGVRVVIAARDTKKAKQVKEKIQKEIPNAKVVILEINLSSFASIHSFCSHFIALDLPLNILINNAGIFSQNLEFSQEKIEMTFATNYIGHFLLTEILLEKMIETAEKSGIEGRIINVSSVIHSWVKNRDAFHFNDIIKGTKYNGTRAYARSKLANILHAKEIARQLKARNARVTINAVHPGIVKTGIIRGHQGLLTDSIFFIGSKLLKSTSQGASTTCYVALSKKTEGISGKYFADCNESKCSRLANDELEAQKLWNQTHALLHNYF* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0006 327 Gene3D - 25 327 - -
Ahy17g0006 327 PANTHER RETINOL DEHYDROGENASE 4 325 - -
Ahy17g0006 327 Pfam short chain dehydrogenase 40 181 IPR002347 -
Ahy17g0006 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 116 127 IPR002347 -
Ahy17g0006 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 180 IPR002347 -
Ahy17g0006 327 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 208 227 IPR002347 -
Ahy17g0006 327 CDD retinol-DH_like_SDR_c_like 40 316 - -
Ahy17g0006 327 PANTHER NAD(P)-BINDING ROSSMANN-FOLD PROTEIN 4 325 - -
Ahy17g0006 327 PRINTS Glucose/ribitol dehydrogenase family signature 40 57 IPR002347 -
Ahy17g0006 327 PRINTS Glucose/ribitol dehydrogenase family signature 208 227 IPR002347 -
Ahy17g0006 327 PRINTS Glucose/ribitol dehydrogenase family signature 166 182 IPR002347 -
Ahy17g0006 327 PRINTS Glucose/ribitol dehydrogenase family signature 116 127 IPR002347 -
Ahy17g0006 327 PRINTS Glucose/ribitol dehydrogenase family signature 231 248 IPR002347 -
Ahy17g0006 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 301 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0006 Ahy-Chr17 123660 127647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0006 19 250 Acyl Lipid Metabolism Gene Families AT1G63380 29.536 1.38e-14 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0006 - - gmx:100799729 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1683 11 101291914 101295366 Ahy17g0006 17 123660 127647 PCT
Ahy17g0006 17 123660 127647 Ahy11g1683 11 101291914 101295366 PCT