Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3669 ATGGGAACCCTTGGGAGAGCCATATACACTGTTGGATTCTGGATTCGAGAAACCGGTCAAGCAATTGATCGCCTCGGTTCCCGTTTTCAAGGGAAATATTACTTCCAAGAGCAGCTGTCTAGGCATCGAACTCTGATGAACATATTTGACAAGACTCCTCTGGTTGATAAGGATGCATTTGTTGCCCCAAGTGCTTCCGTCATCGGTGATGTTAAAATTGGAGGTGGATCATCAATTTGGTATGGATGTGTCTTGAGAGGTGACGTGAACAGCATCAGTGTTGGTAGCGGAACCAACATACAGGACAACTCCTTAGTGCATGTTGCGAAGTCAAATTTAAGTGGAAAGGTGTTGCCTACTATTATTGGAGACAAAGTTACTGTAGGTCATAGTGCTGTTCTACATGGTTGCGTCGTTGAGGATGAGGCTTTTGTTGGTATGGGTGCAACACTACTTGACGGTGTTGTTGTTGAGAAACATGCAATGGTTGCTGCTGGATCCCTTGTGAGACAGAATTCAAAGGTTCCAAGTGGAGAGATATGGGCAGGCAATCCAGCAAAGTTCCTGAGGAAGCTCACTGATGAAGAGATAGCTTTTATCTCCCAGTCAGCCACCAACTATACTAACCTCGCTCAGGTGCACGCAGCAGAAAATGTGAAATCATTTGATGAAATCGAGTTTGAGAAGGGGTTACGAAAGAAGTATGCACGTAAGGACGAGGAGTATGACTCAATGCTCGGTGTTGTCCGTGAGATTCCTCCAGAGCTTATTCTTCCAGATAATATCCTACCGAAACAACAAGAAAAGTCTCTTAAAATTTGA 822 0.444 MGTLGRAIYTVGFWIRETGQAIDRLGSRFQGKYYFQEQLSRHRTLMNIFDKTPLVDKDAFVAPSASVIGDVKIGGGSSIWYGCVLRGDVNSISVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDKVTVGHSAVLHGCVVEDEAFVGMGATLLDGVVVEKHAMVAAGSLVRQNSKVPSGEIWAGNPAKFLRKLTDEEIAFISQSATNYTNLAQVHAAENVKSFDEIEFEKGLRKKYARKDEEYDSMLGVVREIPPELILPDNILPKQQEKSLKI* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3669 273 PANTHER GAMMA CARBONIC ANHYDRASE 1, MITOCHONDRIAL 1 270 - -
Ahy16g3669 273 Gene3D Hexapeptide repeat proteins 43 222 - -
Ahy16g3669 273 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
Ahy16g3669 273 CDD LbH_gamma_CA_like 55 212 - -
Ahy16g3669 273 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Ahy16g3669 273 SUPERFAMILY Trimeric LpxA-like enzymes 47 213 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3669 Ahy-Chr16 154598217 154602115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3669 120 196 Miscellaneous Gene Families AT2G17640 34.884 2.81e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3669 K01726 - rcu:8288953 489.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3669 16 154598217 154602115 Ahy16g3669 16 154598217 154602115 ECH