Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3649 ATGCCCTCTGCATTGTCTTCTTTCCCAGCGCGTGTGACGCTACTCGCTCTCTTCTCCGCCACAACCTTCTACTTCCTCTACAAGTCTCGCCGCTTGCGCCACCTCAAAACCCTCACTCTCTCTTCAAAACACACTACACGTGGCAAAATCCTATTCGTTTCACAAACCGGAACTTCCAAAAACCTAGCACAGCGCCTCCACAATCTCTTAGCCTCAAAGGGCGTCGTTTTCGACCTCGTAGATGCTCAGAGCTACGAGCCCGAAGACTTACCGAAAGAAACCCTAGTTCTCATCGTTGCTTCGACTTGGGAAGATGGGAATCCACCTTCTGGAGCACGGTTTTTTGCCACGTGGCTCGCGGAGAGCGTGAAGGATTTTAGGGTTGGGGCGTTGCTTCTGAAGGGTTGTAGGTTCGGGGTGTTTGGTGTGGGGAGTAGAGCTTATGGAGAGAGGTTCAATGCGGTGGCTAAGGGTTTTGTGAAGCAGATTAGGGATTTGGGTGGGAGTGAGGTTGTGCCTTTAGGGGAAGGTGATGTTGATGGTGGTGAATTGGATTTGGATTTTGAGAAGTGGTGTGAGAAGGTTGTTGGTTTTTTGAAAGGCAAGGTTTTGGAAAATGGGGTTAATGGTAATTTGGAGTGTGGGGTTTATGATTCTGAGGAGGAATCTGAAGGAGAGAGTGATTTGGAGGAAGAGGAAATTGTTGATCTTGAGGACATTGCTGGGAAGGTGCCACCAAGGAAGAAGACGGCAGCGGCAGCTGAGAGTAATGGTAATGGAAATGGAAAAGTGAATGGCCAAAGGGAAATGGTGACTCCAGTTATTAGAGCTAATTTAGAGAAGCAGGGGTATAAAATTATTGGTTCGCATAGCGGTGTTAAGATTTGTAGATGGACCAAGTCACAGCTTCGAGGACGGGGTGGTTGCTACAAGCATTCATTCTATGGTATTGAGAGCCATAGGTGCATGGAGGCAACCCCTAGCCTGGCCTGTGCAAATAAATGTGTTTTTTGTTGGAGACATCACACAAATCCAGTGGGAAAAAGTTGGCAATGGAAGATGGATGATCCAATAGAGATTGTAAATTCTGCAATAGAGATGCATTCAAATATGATTAAACAAATGAAAGGAGTTCCTGGAGTTACCCTGGAGCGACTAAACGAAGGTCTTACACCACGACATTGTGCATTATCTCTTGTTGGGGAACCTATTATGTATCCAGAGATAAATACACTTGTGGATGAACTGCACAAAAGGAGAATTTCCACTTTTCTGGTGACAAATGCACAGTTTCCAGATAAAATAAAGTCAATGAAGCCTCTCACCCAGTTATATGTCAGTGTAGATGCTGCAACAAAAGACTCCTTGAAGGCAATTGATAGGCCACTCTTTGGAGATTTCTGGGAACGATTCATTGATTCCTTGACAGCCCTGAAGGAAAAACATCAAAGAACTGTATACCGCTTGACATTGGTGAAAGGTTGGAACACTGAAGATGTTGATGCTTATTACAAGCTCTTTAGTATTGGAGAACCTGACTTTGTTGAAATCAAGGGAGTTACATATTGTGGCTCCTCTGCCACATCAAAATTGACGATGGAAAATGTGCCTTGGCATGCTGATGTGAAAGCTTTTTCAGAGGCCCTTGCTCTGAAAAGCCAAGGGGAGTATGAAGTTGCTTGTGAACATGCTCATTCATGTTGTGTTCTCTTAGCAAAGACTAAGAAGTTCAAGATTGATGACAAGTGGTATACATGGATAGACTACGATAAATTTCATGACCTGGTGGCGTCTGGAAGAACTTTTGACAGCACAGATTACATGACTGCTACACCTTCATGGGCTGTCTATGGAGCACAGGAAGGTGGTTTCGATCCTGAACAATCAAGATATAGGAAAGAGAGACGACATCATAAATCAAGTCGCAATCAATCAGGTTAG 1941 0.4462 MPSALSSFPARVTLLALFSATTFYFLYKSRRLRHLKTLTLSSKHTTRGKILFVSQTGTSKNLAQRLHNLLASKGVVFDLVDAQSYEPEDLPKETLVLIVASTWEDGNPPSGARFFATWLAESVKDFRVGALLLKGCRFGVFGVGSRAYGERFNAVAKGFVKQIRDLGGSEVVPLGEGDVDGGELDLDFEKWCEKVVGFLKGKVLENGVNGNLECGVYDSEEESEGESDLEEEEIVDLEDIAGKVPPRKKTAAAAESNGNGNGKVNGQREMVTPVIRANLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWQWKMDDPIEIVNSAIEMHSNMIKQMKGVPGVTLERLNEGLTPRHCALSLVGEPIMYPEINTLVDELHKRRISTFLVTNAQFPDKIKSMKPLTQLYVSVDAATKDSLKAIDRPLFGDFWERFIDSLTALKEKHQRTVYRLTLVKGWNTEDVDAYYKLFSIGEPDFVEIKGVTYCGSSATSKLTMENVPWHADVKAFSEALALKSQGEYEVACEHAHSCCVLLAKTKKFKIDDKWYTWIDYDKFHDLVASGRTFDSTDYMTATPSWAVYGAQEGGFDPEQSRYRKERRHHKSSRNQSG* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3649 646 MobiDBLite consensus disorder prediction 620 646 - -
Ahy16g3649 646 ProSiteProfiles Radical SAM core domain profile. 315 558 IPR007197 GO:0003824|GO:0051536
Ahy16g3649 646 CDD Radical_SAM 327 507 - -
Ahy16g3649 646 Pfam Wyosine base formation 510 573 IPR013917 -
Ahy16g3649 646 ProSiteProfiles Flavodoxin-like domain profile. 48 196 IPR008254 GO:0010181
Ahy16g3649 646 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 6 640 IPR034556 GO:0008033|GO:0051539
Ahy16g3649 646 SFLD tRNA wybutosine-synthesizing 266 577 - -
Ahy16g3649 646 SUPERFAMILY Radical SAM enzymes 328 507 - -
Ahy16g3649 646 SFLD tRNA wybutosine-synthesizing 266 577 IPR034556 GO:0008033|GO:0051539
Ahy16g3649 646 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT TRNA 4-DEMETHYLWYOSINE SYNTHASE 6 640 - -
Ahy16g3649 646 SUPERFAMILY Flavoproteins 49 199 IPR029039 -
Ahy16g3649 646 MobiDBLite consensus disorder prediction 246 266 - -
Ahy16g3649 646 Pfam Flavodoxin 50 191 IPR008254 GO:0010181
Ahy16g3649 646 Gene3D Aldolase class I 256 585 IPR013785 -
Ahy16g3649 646 Gene3D - 26 206 IPR029039 -
Ahy16g3649 646 PRINTS Flavodoxin signature 97 108 IPR001094 GO:0010181
Ahy16g3649 646 PRINTS Flavodoxin signature 135 145 IPR001094 GO:0010181
Ahy16g3649 646 PRINTS Flavodoxin signature 49 62 IPR001094 GO:0010181
Ahy16g3649 646 PRINTS Flavodoxin signature 160 179 IPR001094 GO:0010181
Ahy16g3649 646 Pfam Radical SAM superfamily 327 506 IPR007197 GO:0003824|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3649 Ahy-Chr16 154390510 154394270 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3649 K15449 - gmx:100791920 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3649 16 154390510 154394270 Ahy16g3649 16 154390510 154394270 ECH