Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3600 ATGGCCAAACCGAGTGCCGACGATGGCGAGCTCCGGCGGGCATGCACGGCGGCGATTGAGGATCCCCACCAGAAGATCGTGATGGCGATCAGAGTAGCGAAATCCCACGGGATCTTGGGAAAATCTTCCAAGCTTGGCCGCCAGATGGCGAAGCCAAGGGTTCTTGCTCTCTCCATGCAATCAAAAGGTCAGAGGACAACAGCATTTCTTCATGTTTTGAAGTATTCTACGGGAGGAGTTCTTGAGCCTGCTAAACTATACAAGCTGAAGTACCTCTCAAAAGTGGAAGTTTTGACAAATGACCCCAGTGGATGTACATTTACGCTGGGATTTGATAACCTCAGAAGCCAGAGCGTGGCTCCTCCTCAGTGGACAATGCGCAATATTGATGACAGGAATCGCCTCCTTCTTCGCATCCTGAACACATGCAAAGATGTTTTGGGTCGCCTCCCTAAGGTTGTTGGTATAGATGTTGTTGAGATGGCTCTTTGGGCTAAGGAAAATACACCCACGGCTCCTGCTCAGAGTAAAGTTCGAGATGGTGTTCCTGTTGCTTCTGCTGTTTCTGAGACGGAATTGAAAGTCAATGTCGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATAGGTGTTGGTGAAGCTGAGGCATTTTCTGAAAGGTTGAAGAGAGAGCTTCAAGCTCTAGAAGCAGCAAACGTGCATGCCATTTTAGAAAGTGAACCTTTGATGGATGGGGTGATGCAAGGACTTGAGTCAGCAACAAATTGTGTGGATGACATGGATGAATGGTTAAACATATTTAACGTGAAACTCCGGCACATGAGAGAGGACATTGAATCAATAGAATCCCGCAATAACAAATTGGTAATGCAATCGGTGAACAACAAATCTCTTATTGAGGAGCTCGATAAGCTTCTTGAAGGATTGAATGTCCCTCCAGAGTATGCATCAAGTTTGACAGGAGGTTCATTTGATGAAGCTAGAATGCTTCAGAATGTAGAAGCATGTGAATGGTTGACTGGTGCCTTACGTGGTCTTGAAGCGCCTAATCTAGACCCTGCATATGCAAATATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAAACTACTTTTGTTAGGAGAGCATCAGAATTCTTGAGGAATTACTTTGCTAGTTTGGTGGATTTCATGATAAGTGATAAAAGCTACTTCTCTCAGCGAGGACAGTTGAAGAGGCCTGATCATGCGGATTTGCGGTACAAATGCAGGACATATGCACGTCTCTTGCAACACTTGAAGAGTCTTGACAAGAATTGCTTGGGTCCATTGAGAAAAGCTTATTGCAGTTCTCTAAATTTGCTTCTTCGCCGAGAGGCTCGTGAATTTGCAAATGAACTTCGTGCTAGTACTAAAGCATCTAGGAACCCCACGGTTTGGCTTGAAGGTTCTACAGGTTCTGGTCAGAATGTCAATGCCACTGACACTTCAACAGTCTCTGATGCTTACGCAAAGATGCTAACAATTTTTATCCCACTTCTGGTGGATGAGAGTTCATTTTTTGCACACTTCATGTGCTTTGAAGTTCCTACGCTTGTTCCTCCAGGAGGTGTTGTTAATGGTAATAAACCTGAATATGATGACGATGATGATTTAGGAATTATGGACATTGATGACAATGACAGTAAATCTGGTAAAAATTCTGCCGAGCTTGCAGCTTTAAACGAATCACTTCAGGATTTGCTTGATGGAATTCAAGAAGACTTCTACGCGGTTGTAGATTGGGCATACAAGATTGATCCCTTGCGCTGCATATCAATGCATGGAATAACGGAACGATATCTTTCTGGTCAGAAAGCTGATGCAGCAGGATTTGTACGCCTTTTGCTTGGTGACCTAGAGGCTCGTATATCTATGCAGTTTGGCCGTTTTGTTGATGAAGCTTGCCATCAAATTGAAAGGAATGAACGCAATGTTCGCCAAGTTGGTGTCCTATCCTACATTCCCAGATTTGCAACCCTGGCAACTCGGATGGAGCAGTATATTCAGGGACAGTCTAGGGATTTGGTAGACCAGGCATACACAAAATTTGTTAGCATAATGTTTGCGACTTTGGAAAAAATAGCACAAACAGATCCAAAGTATGCTGATATTTTTCTCTTAGAGAACTATGCCGCCTTTCAAAATAGTTTGTATGACCTTGCCAACATTGTGCCTACTTTGGCTAAGTTTTATCACCAGGCTAGTGAAGCCTATGAGCAAGCTTGTACGCGCCATATTAGCATGATAATCTATTATCAATTCGAGCGCCTTTTTCAATTTCATCGGAGGATTGAGGACTTGATGTTCACAGTTGCACCTGAGGAGATTCCTTTCCAACTCGGGCTATCAAAGATGGATCTTCGAAAGATGCTAAAATCCAGTTTATCGGGGGTTGACAAGTCCATTGCTGCAATGTACAAGAAATTGCAGAAGAACTTGACTTCAGAAGAACTATTACCCTCCTTATGGGATAAATGCAAGAAGGAATTTGTTGACAAGTACGAAAGTTTTGCACAACTTGTGGCTAAGATTTACCCTAATGAGAATATCCCTTCGGTAACAGAGATGAGAGAACTTTTAGCCTCCATGTAA 2652 0.4336 MAKPSADDGELRRACTAAIEDPHQKIVMAIRVAKSHGILGKSSKLGRQMAKPRVLALSMQSKGQRTTAFLHVLKYSTGGVLEPAKLYKLKYLSKVEVLTNDPSGCTFTLGFDNLRSQSVAPPQWTMRNIDDRNRLLLRILNTCKDVLGRLPKVVGIDVVEMALWAKENTPTAPAQSKVRDGVPVASAVSETELKVNVEKELVSQAEEEDMEALLGTYVIGVGEAEAFSERLKRELQALEAANVHAILESEPLMDGVMQGLESATNCVDDMDEWLNIFNVKLRHMREDIESIESRNNKLVMQSVNNKSLIEELDKLLEGLNVPPEYASSLTGGSFDEARMLQNVEACEWLTGALRGLEAPNLDPAYANMRAVKEKRAELEKLKTTFVRRASEFLRNYFASLVDFMISDKSYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKPEYDDDDDLGIMDIDDNDSKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLEARISMQFGRFVDEACHQIERNERNVRQVGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLLENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISMIIYYQFERLFQFHRRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFVDKYESFAQLVAKIYPNENIPSVTEMRELLASM* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3600 883 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Ahy16g3600 883 Coils Coil 188 208 - -
Ahy16g3600 883 Coils Coil 281 301 - -
Ahy16g3600 883 Coils Coil 221 248 - -
Ahy16g3600 883 Pfam Exocyst complex component Sec3 224 485 IPR019160 GO:0000145|GO:0006887
Ahy16g3600 883 Pfam Exocyst complex component Sec3 572 867 IPR019160 GO:0000145|GO:0006887
Ahy16g3600 883 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 883 - -
Ahy16g3600 883 PANTHER SEC3/SYNTAXIN-RELATED 1 883 - -
Ahy16g3600 883 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3600 Ahy-Chr16 153647936 153657875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3600 1 883 EF-hand Containing Proteins AT1G47550 85.714 0.0 1575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3600 K19983 - gmx:100784141 1574.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3600 16 153647936 153657875 Ahy16g3600 16 153647936 153657875 ECH
Ahy16g3600 16 153647936 153657875 Ahy6g2845 6 114343931 114353870 hybridization
Ahy16g3600 16 153647936 153657875 Ahy17g2438 17 116433049 116445340 PCT
Ahy16g3600 16 153647936 153657875 Ahy8g2817 8 51683895 51696037 PCT
Ahy17g2438 17 116433049 116445340 Ahy16g3600 16 153647936 153657875 PCT
Ahy8g2817 8 51683895 51696037 Ahy16g3600 16 153647936 153657875 PCT