Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3461 ATGAGAATCAACAACAACATGATCATGAAGAGTTCTCCAAGATCTTCTTCAACACCAATGGATCCAAGAATCTGGAGCAAGCTACCTCCAGAGATCTTAGAATACATCCTCTCTTTTCTTCCCCTCAAAACCTTCCTCAATCTCAGGTCAACTTGCAAGTCTTTCTGGTCTCTCATCTTCACTCCTCCTTTCATAAACAAACACTCTTCTTCTTCTTCTTCTTCTTCTTCACCTTTCTCTAACTTCCTCTTCCTCTCACACCCTCAGTTCCACCATAGCCACTTCACTCTCTATGACTGCAACCACGCCACGTGGCGCAACATCTCCCTCTCCCTCACCACCAATGATTCTTCCTCCCTTCACCATTCTTCTCCATCATCATCATGCTTCACCACACTTGTTTCATCCGGTGGGTTGTTCTGTCTCTCCGATCCAACCTCATGTTCTTTGCTTGTGTGCAATCTCTTGGCAAAAACTTCTAGAAAGATTCAATATCCAAGTTTCAATCTTCACCTTGAGCATCTCACTTTTGTTACAACCCCAAAAGGGTACACAATTTTTGTCCTTTTCTCTCACTCTTCTTCTTCTCCTTCTTCAAGTTCTAGTAATGTGTTTGTCTATGACTCAAAGGTGCTATCTTGGACAAGATTTGAAGGGCGTTTTGGGGTTAATTTAGGTGATAACATTCGCCAGCATCAAGGTGTTTACTTTAATGGGGGTTTGTATTTTGCAACCCCAGAGCCATTTTCTGTGGTGAAATTTGATTTGGGGATTGGGAAATTGGAGAGACCAATTGGGGTGTTACCAAATCAAGTTACATTCTTGAGATTGGTGGGGGATGGAGGAGAGGGTAAAAAAATGTACTTGGTTGGTGGGGTTGGGAGCAATGGAATCTCAAGGAGCATAAAATTGTGGGAGTTTTGTGAAGAAAATGATTATGGGAATTATTGGAATGAAGTTGAGAGTTTACCTGATCTTATGTGTAGGAAATTTGTGTCAGTTTGTTACCATAACTATGAACATGTTTATTGCTTTTGGCATGAAGGGATGATATGCATTTGTTGCTACACTTGGCCTGAGATTTTGTATTACTTGGTTTCAAGGAAGACATGGCATTGGCTTCCAAGGTGCCCTTCTTTGCCTCTCAAATGTAGCTGTGGATTCAAGTGGTTCTCTTTTGTTCCTAATCTCTATGCTGCTGTTTGA 1206 0.4154 MRINNNMIMKSSPRSSSTPMDPRIWSKLPPEILEYILSFLPLKTFLNLRSTCKSFWSLIFTPPFINKHSSSSSSSSSPFSNFLFLSHPQFHHSHFTLYDCNHATWRNISLSLTTNDSSSLHHSSPSSSCFTTLVSSGGLFCLSDPTSCSLLVCNLLAKTSRKIQYPSFNLHLEHLTFVTTPKGYTIFVLFSHSSSSPSSSSSNVFVYDSKVLSWTRFEGRFGVNLGDNIRQHQGVYFNGGLYFATPEPFSVVKFDLGIGKLERPIGVLPNQVTFLRLVGDGGEGKKMYLVGGVGSNGISRSIKLWEFCEENDYGNYWNEVESLPDLMCRKFVSVCYHNYEHVYCFWHEGMICICCYTWPEILYYLVSRKTWHWLPRCPSLPLKCSCGFKWFSFVPNLYAAV* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3461 401 Gene3D - 80 388 IPR015915 GO:0005515
Ahy16g3461 401 SMART fbox_2 28 68 IPR001810 GO:0005515
Ahy16g3461 401 ProSiteProfiles F-box domain profile. 22 68 IPR001810 GO:0005515
Ahy16g3461 401 PANTHER F-BOX/KELCH-REPEAT PROTEIN 24 399 - -
Ahy16g3461 401 SUPERFAMILY F-box domain 19 97 IPR036047 GO:0005515
Ahy16g3461 401 MobiDBLite consensus disorder prediction 1 22 - -
Ahy16g3461 401 Pfam F-box domain 25 55 IPR001810 GO:0005515
Ahy16g3461 401 Gene3D - 23 66 - -
Ahy16g3461 401 PANTHER F-BOX/KELCH-REPEAT PLANT PROTEIN 24 399 - -
Ahy16g3461 401 SUPERFAMILY Kelch motif 86 384 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3461 Ahy-Chr16 151922788 151924142 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3461 - - adu:107495892 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3461 16 151922788 151924142 Ahy16g3461 16 151922788 151924142 ECH