Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3395 ATGGCGTCGCAAGATTCGCTTCCGAAGACCGCCGACTCTTCGAAGCTTGCCGATCATCATACTCTTCTCAGCATCTGCAACTCTCTTGCCGCTGGTGGAATCGCAGGTGGAGTGTCGCGAACAGCTGTGGCTCCTTTGGAGAGATTAAAGATTCTGCTGCAGGTCCAAAATCGTGACAATATAAAATACAAAGGAACTATTCAAGGCTTAAAATATATATGGAGAACTGAGGGTTTTAAAGGGATGTTTAAAGGAAACGGAACTAACTGTGCCCGTATTGTCCCAAATTCGGCAGTGCAGTTCTTAAGCTACGAGGAAGTATCTAGGGGTATTTTGTGGCTCTACCGGCAACAAACTGGAAACGAAGCAACTCAGCTCAGTCCTCTTATGCGTCTTGGAGCCGGCGCATGTGCTGGAATCATTTCCATGTCTGCAACTTACCCTATGGACATGGTGCGAGGTCGGCTAACTGTCCAGACAGAGGCATCCCCACACCAATACAGAGGAATTTTTCATGCTCTGTCAACAGTTTTCCGGGAAGAAGGCCCTCGAGCCTTGTATAAAGGATGGTTACCATCAGTCATAGGAGGAGTTATACCATATGTAGGTCTCAATTTTTCAGTGTATGAATCTTTGACGGACTGGTTGATTCGATCCAATCCACTTGGAATAGCTAAAGACTCTGAGCTAAGTGTTACCACAAGGCTTGCATGTGGGGCAGCCGCTGGCACTGTTGGTCAGACAGTGGCTTACCCCCTTGATGTCATTCGCCGGAGAATGCAGATGGTAGGCTGGAAAAATGCTCCTTCAGTTGTTGCTGGTGATGGAAAGAGCAAAGCTGAGTACGCTGGCATGGTTGATGCATTCAGGAAAACTGTGCAGCATGAAGGATTTGGAGCATTATACAAGGGCTTAGTACCCAATTCAGTGAAGGTGGTCCCGTCTATAGCTATTGCTTTCGTGTCATATGAGATGGCGAAGGACATGCTCGGAGTTGAATATCGGACATCTGACTGA 1017 0.473 MASQDSLPKTADSSKLADHHTLLSICNSLAAGGIAGGVSRTAVAPLERLKILLQVQNRDNIKYKGTIQGLKYIWRTEGFKGMFKGNGTNCARIVPNSAVQFLSYEEVSRGILWLYRQQTGNEATQLSPLMRLGAGACAGIISMSATYPMDMVRGRLTVQTEASPHQYRGIFHALSTVFREEGPRALYKGWLPSVIGGVIPYVGLNFSVYESLTDWLIRSNPLGIAKDSELSVTTRLACGAAAGTVGQTVAYPLDVIRRRMQMVGWKNAPSVVAGDGKSKAEYAGMVDAFRKTVQHEGFGALYKGLVPNSVKVVPSIAIAFVSYEMAKDMLGVEYRTSD* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3395 338 Gene3D Mitochondrial carrier domain 20 332 IPR023395 -
Ahy16g3395 338 PANTHER SOLUTE CARRIER FAMILY 25 13 333 - -
Ahy16g3395 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 215 IPR018108 -
Ahy16g3395 338 SUPERFAMILY Mitochondrial carrier 23 324 IPR023395 -
Ahy16g3395 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 329 IPR018108 -
Ahy16g3395 338 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 13 333 - -
Ahy16g3395 338 PRINTS Mitochondrial carrier protein signature 28 41 IPR002067 GO:0055085
Ahy16g3395 338 PRINTS Mitochondrial carrier protein signature 187 205 IPR002067 GO:0055085
Ahy16g3395 338 PRINTS Mitochondrial carrier protein signature 41 55 IPR002067 GO:0055085
Ahy16g3395 338 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Ahy16g3395 338 PRINTS Mitochondrial carrier protein signature 85 105 IPR002067 GO:0055085
Ahy16g3395 338 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Ahy16g3395 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 110 IPR018108 -
Ahy16g3395 338 Pfam Mitochondrial carrier protein 24 110 IPR018108 -
Ahy16g3395 338 Pfam Mitochondrial carrier protein 229 330 IPR018108 -
Ahy16g3395 338 Pfam Mitochondrial carrier protein 126 219 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3395 Ahy-Chr16 150981939 150985420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3395 27 333 EF-hand Containing Proteins AT5G51050 37.338 1.97e-61 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3395 K14684 - gmx:100784834 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3395 16 150981939 150985420 Ahy16g3395 16 150981939 150985420 ECH