Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3350 ATGAAATTCGGGTGCTTGTTCACGGAGTATCTGCAGGAAGAGAGGGAGTTGTTGGATGAGAAATGCGCGCACATTGAATATGTGAGGTTGAAGAAAGTTCTCAAGAGCTGCCAGACCTGCAAACCATTGCACTCTTCTTCTTCTTCTTCTTCTCCTTCCCTTGTTTCTGATCTTCCTAACCATCAATTGTGCCAATGTCAATCCTGCCCAGTGTGTGATCAGAAGTTCTTCTCGGAGCTGATGAAGGAAGCATCAGATATAGTAGGGTTCTTCGGTTCAAGGGTTAAGCATCTTCTTGATCTTCATGTTGCGTCTGGAATGCAGAGATATGTATTGCGCCTACGACAGTGCTTTAAAAATGATAGGCAAGCCCTCGCACAAGAAGGGAGAATTTTAATTGAGTACATTGCAATGAATGCTATTGCCATGAGGAAAATACTTAAGAAATATGATAAAGTTCACAGCTCTGTGAATGGAAAGAATTTCAAATCTAAGATGCACACTGAGCACATTGAACTTTTACACACACCTTGGCTAATTGAATTGGGTGCTTTTTATCTGAATTCTAGTGGACGAGATTGTTGTGAACTCAATGGAGTGTATGGTCACTTTAAGTGTGATCTAAATGTTAGTGACGCTGTAATGACGTTGATTCTTCCAGATTCTATCAAGCTCGAGTATAATCTAACTTGCGCAATATGTCTGGATTTGGTTTTCAACCCCTATGCTTTGGGTTGTGGTCATATCTTCTGCAAGTCATGTGCCTGTTCAGCTGCCTCTGTGATGATGTTCCAAGGCCTTAAAGCTGCAAGTCCTGAGTCTAAGTGTCCCATATGCAGAGAGGATGGAGTTTATCCTAAGAAAGTACGCATGTTAGAACTTGGTCTACTAATGAAAAGAAGGTACAATGATTACTGGAAAGAGAGGCTACTTAGCGAACGAAACAACATGGTGAAGCAATCCAAAGAATACTGGAATATGCAGTCTGCATATGCACTTGGATTACACTAG 1011 0.4135 MKFGCLFTEYLQEERELLDEKCAHIEYVRLKKVLKSCQTCKPLHSSSSSSSPSLVSDLPNHQLCQCQSCPVCDQKFFSELMKEASDIVGFFGSRVKHLLDLHVASGMQRYVLRLRQCFKNDRQALAQEGRILIEYIAMNAIAMRKILKKYDKVHSSVNGKNFKSKMHTEHIELLHTPWLIELGAFYLNSSGRDCCELNGVYGHFKCDLNVSDAVMTLILPDSIKLEYNLTCAICLDLVFNPYALGCGHIFCKSCACSAASVMMFQGLKAASPESKCPICREDGVYPKKVRMLELGLLMKRRYNDYWKERLLSERNNMVKQSKEYWNMQSAYALGLH* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3350 336 ProSiteProfiles SPX domain profile. 1 164 IPR004331 -
Ahy16g3350 336 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 333 IPR033326 -
Ahy16g3350 336 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED 1 333 - -
Ahy16g3350 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 217 331 IPR013083 -
Ahy16g3350 336 ProSitePatterns Zinc finger RING-type signature. 246 255 IPR017907 -
Ahy16g3350 336 SMART ring_2 231 279 IPR001841 -
Ahy16g3350 336 CDD SPX_BAH1-like 2 160 - -
Ahy16g3350 336 ProSiteProfiles Zinc finger RING-type profile. 231 280 IPR001841 -
Ahy16g3350 336 SUPERFAMILY RING/U-box 223 282 - -
Ahy16g3350 336 Pfam RING-type zinc-finger 231 277 IPR027370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3350 Ahy-Chr16 150450933 150454111 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3350 K16275 - gmx:100781704 521.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3350 16 150450933 150454111 Ahy16g3350 16 150450933 150454111 ECH
Ahy16g3350 16 150450933 150454111 Ahy6g0806 6 10087316 10090550 hybridization