Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3349 ATGTCAAATTTCTCGTCGTGGTTCTCTCGCTTGCGCTCTTCTTCCAACTACTTCTATCGCACTATCCATAATATAACAACTCACTCGAATGCAACCAATGTGCTGACCTCACACCGTCCAAGGATGACGTGGACAGGTTCCGTGCTTCCTCTTGCGGTGGCTGTATGCGGTGCTTCATTTGCGCTTCATCCGCACTTCAATCCTTCCTTGTGTGACGCCTCTGTTCCCTCTGATGCCATTAACAACAGCTTTGGGGGCAAAGGTAGCACCCAGTATGCCGTTAAGGGATCACACAAAGAATTTCCGCAGGAGCTTCTCCACGAATTGAAACTCATCTGTCAGGATAACTTATCACTTGATTATGATGAAAGATACCACCATGGAAAACCACAAAACAGCTTTCATAAGGCTGTTAATATCCCAGATGTTATCGTTTATCCAAGATCTGAAGAAGAAGTTTCCAAGATTGTAAAATCATGTAACGACTATAAGGTTCCTATTGTACCTTATGGTGGAGCTACATCAATTGAGGGTCACACCTTATCGCCTCACGGAGGGGTTTGCATTGACATGTCATTAATGAAAAGAGTGAAGGCATTACATGTTGATGACATGGATGTCATTGTTGAGCCTGGAATTGGATGGATGGAACTTAATGAGTATTTGGAACCTTATGGTCTATTTTTTCCACTTGATCCAGGTCCTGGTGCAAGCATTGGAGGCATGTGTGCTACACGCTGCTCTGGGTCTTTAGCTGTGAGATATGGAACTATGCGTGATAATGTGATCAGTCTCAAGGTAGTTCTTGCCAATGGAGATATTGTGAAGACTGCATCTCGTGCTAGAAAGAGTGCTGCAGGGTATGACCTGACCCGTTTGGTGATTGGAAGTGAAGGAACACTTGGTGTTGTTACAGAAGTAACACTAAGACTTCAGAAAATTCCCCAGCATTCAGTGGTTGCCATGTGCAATTTCCCTTCTGTTAAGGATGCAGCAGATGTTGCTATTGCCACTATGATGTCTGGTATACAGGTGAAAGCCATCAATGTTGCTAATGGGAAGAATTTCCCTGAATGTCCAACGTTAATGTTTGAATTTATAGGAACAGAGGCATATGCACGTGAGCAAACACAAATTGTTCGGGGAATTGTTTCTAAGCACAATGGATCGGACTTTGTATTCGCGGAAGAACCTGAAGCTAAAAAAGAACTTTGGAAGGTAAGGAAGGAGGCACTTTGGGCTTGTTTTGCAATGGAACCTAATATGGAGGCAATGATTTCGGATGTATGTGTTCCCTTATCTCACCTTGCTGATTTAATTTCAAGGTCTAAAAAGGAGTTGGATGCATCACCACTGGTTTGCACGGTAATTGCTCATGCTGGGGACGGTAATTTCCACACGGTAATTCTCTTTGACCCTAGCCGAGAAGAACATCGGAAGGAGGCAGAGAGACTCAACAGCTTTATGGTTCATGCTGCTTTGTCATTGGAAGGAACTTGTACCGGTGAACATGGTGTTGGAACTGGGAAAATGAAGTACCTTGAAGAAGAACTGGGAGTGGAAGCATTAAGGACAATGAAGAAAATAAAACAAGTGTTAGATCCCAACAATATCATGAATCCCGGAAAGCTCATCCCTCCCCATGTTTGCTTGTAA 1656 0.4354 MSNFSSWFSRLRSSSNYFYRTIHNITTHSNATNVLTSHRPRMTWTGSVLPLAVAVCGASFALHPHFNPSLCDASVPSDAINNSFGGKGSTQYAVKGSHKEFPQELLHELKLICQDNLSLDYDERYHHGKPQNSFHKAVNIPDVIVYPRSEEEVSKIVKSCNDYKVPIVPYGGATSIEGHTLSPHGGVCIDMSLMKRVKALHVDDMDVIVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLVIGSEGTLGVVTEVTLRLQKIPQHSVVAMCNFPSVKDAADVAIATMMSGIQVKAINVANGKNFPECPTLMFEFIGTEAYAREQTQIVRGIVSKHNGSDFVFAEEPEAKKELWKVRKEALWACFAMEPNMEAMISDVCVPLSHLADLISRSKKELDASPLVCTVIAHAGDGNFHTVILFDPSREEHRKEAERLNSFMVHAALSLEGTCTGEHGVGTGKMKYLEEELGVEALRTMKKIKQVLDPNNIMNPGKLIPPHVCL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3349 551 PANTHER D-LACTATE DEHYDROGENASE 79 547 - -
Ahy16g3349 551 Gene3D - 423 504 - -
Ahy16g3349 551 SUPERFAMILY FAD-linked oxidases, C-terminal domain 319 547 IPR016164 GO:0003824|GO:0050660
Ahy16g3349 551 ProSiteProfiles PCMH-type FAD-binding domain profile. 137 314 IPR016166 GO:0071949
Ahy16g3349 551 Pfam FAD linked oxidases, C-terminal domain 314 544 IPR004113 GO:0003824|GO:0050660
Ahy16g3349 551 Pfam FAD binding domain 141 277 IPR006094 GO:0050660
Ahy16g3349 551 Gene3D - 505 545 IPR016171 -
Ahy16g3349 551 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 79 547 - -
Ahy16g3349 551 SUPERFAMILY FAD-binding/transporter-associated domain-like 108 315 IPR036318 GO:0050660
Ahy16g3349 551 Gene3D - 100 334 IPR016169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3349 Ahy-Chr16 150442917 150450606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3349 K00102 - gmx:100803612 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3349 16 150442917 150450606 Ahy16g3349 16 150442917 150450606 ECH
Ahy16g3349 16 150442917 150450606 Ahy6g0807 6 10090879 10097156 hybridization