Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3340 ATGAACCATTTCGGAGACAAAAATTGCGTTTTTCAATTTCTCAAGCTCTGCCACCACCACCAGCAGCAATGGCGGCGGAGCATAGTGAAGGTGCGGCTCAAGTGGGTGAAGAACCGAAGCCTCGACCACATCATCGACAAAGAAACCGATCTAAAAGCCGCTTGCCTCCTCAAGGACGCCGTGAAGCGCTCCTCCGCCGGATTCCTGACGGCGAAGTCCGTCGCCGACTGGCAGAAGCTCCTCGGGCTGACAGTCCCCGTCCTCCGTTTCCTCCGCCGCTATCCTTCCCTCTTCGAGGAGTTCCCGCACCCTCGCTGGCCATCCCTCCCCTGCTTCCGCCTCACCGACACCGCAAAGCTCCTCGATTCGCTCGAAGAAGAAATCCACCAGAGCCACGAAAACGACGCCGTGGAGAGGCTCTCGAAGGTGCTGCTGATGATGAGAACCAAAACGGCGCCGCTGCACGCACTCCAGCCTCTGAAATGGGACCTCGGCCTCCCCGATTGCTTCGAGAAAACCCTAATCCTCAAATTCCCCGAACAGTTCCAGCTGGTAAAGTACCCTAACGGCGTGAGCGGACTGAAAATATCGCAATGGCGGGAAGATCTGGCGGTTTCAGCATTACAGAAGATGAATGAGTGCAGAGAATCGAAGAGAGGAAAAGCGGCATTAGTATTTCCGATGAGGTTCCCGAGAGGTTACGGATCTCAGAAAAAGGTTAGGAGTTGGATGGAAGAGTTCGAGAAGCTTCCATACATATCTCCGTATGCAGATTGCAGTAAAATTGATCCTGAAAGTGATCTGATGGAGAAGAGGGTTGTTGGAGTTCTGCACGAGTTTCTGAGTTTGAGTATTCATAAGAAAACAAAGAGGAACTACCTTCGCAGTTTGAGACAAGAGTTGAGTCTTCCGCATAAGTTTACAAGGATTTTCACTCGCTACCCTGGCATCTTTTACTTGTCTCTCAAGTGTAAGACTACTACTGTCACTCTCAGAGAAGCCTATCAGAGTGGCAAGCTTGTGGATCCTCATCCACTTGCTCGCCATAGAGACAAGTTCTACCATGTCATGAGAACCGGCCTTCTCTATCGGGCCAAAGGCGCCCTAGTAGAGGAGGCCGATCCTCATGCTCATGGAGGAGAGGATTCTGAAGAGGTTGAATCGAGTGATGAGTTGTGTGAGGATGAGGTTTCGGATTCAGAAGATGAATAA 1212 0.514 MNHFGDKNCVFQFLKLCHHHQQQWRRSIVKVRLKWVKNRSLDHIIDKETDLKAACLLKDAVKRSSAGFLTAKSVADWQKLLGLTVPVLRFLRRYPSLFEEFPHPRWPSLPCFRLTDTAKLLDSLEEEIHQSHENDAVERLSKVLLMMRTKTAPLHALQPLKWDLGLPDCFEKTLILKFPEQFQLVKYPNGVSGLKISQWREDLAVSALQKMNECRESKRGKAALVFPMRFPRGYGSQKKVRSWMEEFEKLPYISPYADCSKIDPESDLMEKRVVGVLHEFLSLSIHKKTKRNYLRSLRQELSLPHKFTRIFTRYPGIFYLSLKCKTTTVTLREAYQSGKLVDPHPLARHRDKFYHVMRTGLLYRAKGALVEEADPHAHGGEDSEEVESSDELCEDEVSDSEDE* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3340 403 Pfam Plant organelle RNA recognition domain 36 360 IPR021099 GO:0003723
Ahy16g3340 403 PANTHER OS04G0546100 PROTEIN 20 401 - -
Ahy16g3340 403 MobiDBLite consensus disorder prediction 384 403 - -
Ahy16g3340 403 MobiDBLite consensus disorder prediction 373 403 - -
Ahy16g3340 403 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 20 401 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3340 Ahy-Chr16 150353685 150355345 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3340 - - gmx:100808403 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3340 16 150353685 150355345 Ahy16g3340 16 150353685 150355345 ECH