Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3335 ATGAAACCCCTCCCTCTTAATCTTCACCACACCATGCTAACGGAATCCATTACCCGTTTTCTAACCCAATACCGAAACGGCGTCGTTCAGTTCAACGACTTCACCTCAATCTTCTCCCGAACCCTTCACTCCCTCCCAAACCCACCCCTTCACCTTCTCTGGTTCTACTCCGCCCTCGAATTCCACACCCTTCGTTTACAACCTTCTAGAACACCAACACCATCACTTTTAGAACCTTCTAGAGCTTCTCCTCCTCTGCTCCCTTCCGTTACTAACCTCAAGGACCTCTTTCAGTTGCTGGTTTCTTGCTCCTCTACCTGCGGCTCCACCAAAAGAATCGCTGCACTCGCACCTTTGCTGTCTCAATTGTACCGTTTGCTGGTTCGCGAGAAGGGATTGGTAAAGAGCGAGGAGGGTCAGGGTTTGATCGAAGGGATCGTTGGTTATTGCAGCCTTGCTTGCAGTGACGCGATTCGTGGCCATGGTGGTGATGAAGATGAAGTGGTGGTTTTGGACTCGGATTTTGTGGATTTAATTAGGGTTTGGATGGTCGATGATGAGGAAAGTGGGAGTGATGATTGTGTGAGGGCGTTCTTCCCTTTGGTGAGTGAGGGGTTTCTGAAAGAGATGATGATGATGAAGAATGGTTGCGAGGTTGGGTTCTTGTCTGGAGTTGTCATGTGCCAAGCTCTGTTGTTGAAACTGTGCTTGGAGTTTGAACCATGTTCAGAGAGATTGGAGATGGAGAAGAAGCTTCAGGGTTGTGCTGTTCAGACCATAACAGGGTTTAGGAATTTCTGCCTTTTAGATATTCTTTTCAGGATGATGTTGGAGCCAGTTTTGCCAGTGATCTCCCTATTGGGTTTGGAAAATTCAGTTCTTCTAAAAGATGTCCTGTTCAATTCTGTGATGATGATAGAGTATTCATTCATCAATCCTCAAGCAGGAGTTTCACTACATGCCAAGAACTTGAAAGATGTTGCTATAACCTGGTTGTTTGTTGCTGACTTAGCTATACATTCTGCTAGGGAAAAGGGCGATCATGGCAAGGCTATGTCTTATGTAAATGGCTTCTCCAAATCCTGCATACCCGTTCAGTTGATCAACTGGGTTATTAATCAAATTGGCATAACTAGAAAGATCAGCAGACCAAATGTTTCCACCCCCATAGCCCTTATAAAGTGGCTTCTAGATGTTCAGGATCAAGGATTGGCGGTATTTGGGGGTGCCAATCATCGTGCTAAAGCTAACTTTTTTACTTCAAGATCTGAGTGTATGCTCCCAGTGATAAAACATTTCTTTAACAACCTGGATAGGAATCTCCCTGCTAATTCCATTAATGGAGTGATAGAGCCTGAAAAACCAGATGCTGATATAGAGATGGTTGATAGTTTGGATGTATGTTTTGCTGACGATGATAATATAATGAGCACACCCAACACTGATGGAACGAGAAAACGCAAAGAATGGATTGAGGATGAAACTAAAATGCAGTTAAAGTTTATGAGATGCCACCAGTTTCAAGAGAATTCAGTGAGAGAAAACTCATTTGTTTTCAGGCAATAG 1566 0.4406 MKPLPLNLHHTMLTESITRFLTQYRNGVVQFNDFTSIFSRTLHSLPNPPLHLLWFYSALEFHTLRLQPSRTPTPSLLEPSRASPPLLPSVTNLKDLFQLLVSCSSTCGSTKRIAALAPLLSQLYRLLVREKGLVKSEEGQGLIEGIVGYCSLACSDAIRGHGGDEDEVVVLDSDFVDLIRVWMVDDEESGSDDCVRAFFPLVSEGFLKEMMMMKNGCEVGFLSGVVMCQALLLKLCLEFEPCSERLEMEKKLQGCAVQTITGFRNFCLLDILFRMMLEPVLPVISLLGLENSVLLKDVLFNSVMMIEYSFINPQAGVSLHAKNLKDVAITWLFVADLAIHSAREKGDHGKAMSYVNGFSKSCIPVQLINWVINQIGITRKISRPNVSTPIALIKWLLDVQDQGLAVFGGANHRAKANFFTSRSECMLPVIKHFFNNLDRNLPANSINGVIEPEKPDADIEMVDSLDVCFADDDNIMSTPNTDGTRKRKEWIEDETKMQLKFMRCHQFQENSVRENSFVFRQ* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3335 521 PANTHER SNF2 DOMAIN PROTEIN 7 519 - -
Ahy16g3335 521 PANTHER OS01G0600300 PROTEIN 7 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3335 Ahy-Chr16 150317222 150322652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3335 - - gmx:100814255 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3335 16 150317222 150322652 Ahy16g3335 16 150317222 150322652 ECH
Ahy16g3335 16 150317222 150322652 Ahy6g2628 6 111545219 111550562 hybridization