Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3331 ATGGCCTCTTCAGAAATATACTACTCTAATTTGCAAGCTCTAACACAAGAAGAATTGGCTGAACTTGACCCAATCATAAAAAAATATCACATTTTCAATGATCCCTCCCCAAACACGTGCACTTCGATAATAACCTACCGGATCGAAGCTCCGGCGAACGCGGTATGGCCGTTCGTCCGAAGCTTCGAGAATCCCCAGAAGTACAAGCACTTCATAAAGGGGTGCAATATGAGAGGAGATGGCGGCGTTGGCAGCATCAGGGAGGTAACCGTCGTTTCGGGCCTCCCAGCATCAACCAGTACTGAGAGGCTCGAAATTTTAGACGATGACCTCCACATACTGAGCTTTAAGGTAGTTGGAGGCGAACATCGCCTCCAAAACTACCGCTCGGTAACGTCGGTTAACGAATTCAACATAGGAAACAGGGCTTATACAATTGTTTTGGAGTCTTATATTGTGGATATACCACAAGGGAACACCGAAGAAGATACCAAGATGTTTGTTGATACCGTTGTTAAGCTCAACCTTCAGAAACTTGGTGTGGTTGCCATGGCTAGTTGA 561 0.4581 MASSEIYYSNLQALTQEELAELDPIIKKYHIFNDPSPNTCTSIITYRIEAPANAVWPFVRSFENPQKYKHFIKGCNMRGDGGVGSIREVTVVSGLPASTSTERLEILDDDLHILSFKVVGGEHRLQNYRSVTSVNEFNIGNRAYTIVLESYIVDIPQGNTEEDTKMFVDTVVKLNLQKLGVVAMAS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3331 186 PANTHER - 16 185 - -
Ahy16g3331 186 Pfam Polyketide cyclase / dehydrase and lipid transport 47 179 IPR019587 -
Ahy16g3331 186 SUPERFAMILY Bet v1-like 40 179 - -
Ahy16g3331 186 Gene3D - 5 186 IPR023393 -
Ahy16g3331 186 CDD PYR_PYL_RCAR_like 47 179 - -
Ahy16g3331 186 PANTHER ABSCISIC ACID RECEPTOR PYL2-LIKE 16 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3331 Ahy-Chr16 150274855 150275821 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3331 K14496 - gmx:100778183 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3331 16 150274855 150275821 Ahy16g3331 16 150274855 150275821 ECH
Ahy16g3331 16 150274855 150275821 Ahy6g2623 6 111506491 111507383 hybridization
Ahy16g3331 16 150274855 150275821 Ahy17g3168 17 133503684 133504757 PCT
Ahy16g3331 16 150274855 150275821 Ahy8g0880 8 17085543 17086438 PCT
Ahy17g3168 17 133503684 133504757 Ahy16g3331 16 150274855 150275821 PCT
Ahy8g0880 8 17085543 17086438 Ahy16g3331 16 150274855 150275821 PCT