Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3320 ATGGAACGTGCAAGGAGGCTCGCAAACCGCGCCATTCTGAAGCGCCTCCTCTCTCAAACAAAACAGCACCGTCACCACGAGCCTCTCTCCAACTCTTCCTCTTCTTCCCCCGTTCTCTACTCTCCGTCCAGATGCGTCTCCACCGTAACTCCCTCTGTTCTCCGCAACAGAGCATCATTCCATCATTTCTCTCAACAACAAACTCGCCGAATTTCCGTTACTGCCCTCCAGCCCAGCGACACCTTCCCACGCCGCCACAACTCCGCTACCAAAGAAGAACAGAGCAAGATGTCTCAGTCTTGCGGCTTCGACTCTCTTGATTCCCTCATCGACGCCACCGTTCCCAAATCCATTCGCCTCAACGACTTCGCCTTCTCTAAGTTCGATGCAGGATTGACGGAGGGCCAGATGATTGAGCACATGAAGGATTTGGCGTCGAAGAACAAAGTTTTCAAGTCTTTTATTGGAATGGGATATTACAACACTCATGTGCCACCTGTCATCTTGAGGAACATCATGGAGAACCCTGCTTGGTACACGCAGTACACTCCTTACCAGGCTGAGATTTCGCAGGGCCGTCTCGAGTCATTGCTTAATTTCCAGACCATGATCACTGATCTCACTGGCTTGCCTATGTCCAATGCTTCATTGCTTGATGAAGGAACTGCTGCTGCTGAAGCAATGTCTATGTGTAACAACATCCAGAAAGGGAAGAAGAAGACTTTTGTTATTGCAAGTAACTGTCATCCTCAAACAATTGATATATGCAAAACAAGGGCTGCTGGTTTTGATCTTGAGGTTGCCACTGTGGATCTTAAGGATATTGATTACTCAAAAGGTGATGTTTGTGGTGTGCTTGTTCAGTACCCCGGGACTGAGGGTGAGATTCTGGACTATGGGGAGTTTATCAAGAAGGCACATGCTCATGGGGTTAAGGTTGTTATGGCCAGTGATCTCTTGGCACTGACTGTGTTGAAGCCTCCTGGTGAGTTGGGGGCAGATATTGTTGTTGGCTCGGCTCAGAGGTTTGGTGTTCCGATGGGCTATGGAGGGCCTCATGCCGCTTTCTTGGCAACATCACAAGAGTACAAGAGGATGATGCCTGGGAGGATTATTGGTGTCAGTGTTGATTCTTCTGGAAAGTCGGCTTTGAGAATGGCGATGCAAACAAGGGAACAGCATATTCGGAGGGACAAGGCTACTAGCAACATTTGCACTGCTCAGGCGCTGCTTGCAAATATGGCTGCTATGTTTGCTGTATATCATGGACCGGAAGGCCTTAAGACCATTGCTCAACGTGTTCATGGTCTTGCTGGTGTATTTGCCCTGGGATTGAAGAAACTTGGAGTAGAAGTTCAGGGTCTTCCCTTCTTTGACACTGTGAAGGTTAAGGTTCCCAATGCCCACGCAATCGCTGATGCTGCTGTGGAAAGTGAAATAAACTTGCGAGTTGTAGATGGAAAAACTATAACCGTTGCTTTTGATGAAACAACCTCATTGGAGGATGTTGATACACTTTTCAAAGTCTTTGCTGGTGGCAAGCCAGTTTCCTTCACAGCTGCTTCTCTTGCGCCAGAAGTCGAGTCTGCGATTCCTTCTGGATTAACTAGGGAGAGCCCTTATCTGACGCACCCTATCTTCAACACGTACCACACTGAGCATGAGTTACTCAGGTACATTCATAGGTTACAATCCAAGGATCTCTCATTATGCCACAGCATGATTCCACTTGGATCTTGTACTATGAAGTTGAATGCAACAACTGAGATGATGCCAGTAACATGGCCCAGCTTCACTGATATTCACCCTTTTGCACCAACTGAACAGGCTCAAGGTTATCAGGAAATGTTCGACAATTTGGGTGACTTGCTGTGTACCATCACCGGGTTTGACTCCTTCTCTTTGCAACCAAATGCTGGAGCTGCAGGAGAGTATGCTGGGCTGATGGTTATTCGAGCATATCATTTGGCAAGAGGAGACCACCACCGCAATGTTTGCATTATACCTGTCTCGGCACATGGTACAAATCCTGCCAGTGCTGCCATGTGTGGCATGAAAATTGTTTCTGTGGGAACCGATGCCAAGGGTAATATTAACATTGCAGAGTTGAGGAAGGCCGCTGAAACTCACAAGGACAACTTATCAGCACTTATGGTAACATATCCCTCAACCCATGGTGTTTATGAAGAGGGTATAGATGAGATTTGCAAGATTATTCATGATAATGGAGGCCAAGTATACATGGATGGTGCCAATATGAATGCACAGGTGGGTCTTACAAGCCCTGGTTGGATTGGAGCAGATGTTTGCCATCTCAATCTCCATAAGACATTTTGCATCCCTCATGGAGGAGGTGGCCCTGGTATGGGTCCAATTGGTGTAAAGAAACACTTGGCACCATTTTTACCTTCACACCCTGTGGTACCCACTGGTGGAATTCCCGCCCCAGAGAACTCTCAACCTCTTGGTACCATCTCTGCTGCACCTTGGGGCTCAGCACTCATATTGCCAATCTCCTACACTTACATTGCCATGATGGGTTCGAAAGGACTCACCGATGCATCAAAGATAGCCATTTTGAATGCGAACTACATGGCGAAACGATTGGAGAATCATTACCCTGTTCTTTTCCGTGGAGTCAATGGAACTGTTGCTCATGAATTCATCATTGACTTAAGAGGCTTTAAGAACACTGCTGGAATAGAGCCTGAAGACGTTGCAAAGCGCCTCATGGACTATGGCTTTCATGGACCAACAATGTCATGGCCTGTACCTGGCACACTCATGATTGAACCCACTGAAAGTGAAAGCAAGGCTGAGTTAGACAGGTTCTGTGATGCTCTTATTTCCATCAGAGAAGAAATTGCTGAGATAGAGAAAGGAAAAGCTGACATTAACAACAATGTGCTCAAGGGAGCTCCTCATCCACCATCATTGCTCATGGGAGATGCATGGACCAAACCATACTCCAGGGAATATGCAGCCTTCCCAGCTCCCTGGCTCCGCGTCGCAAAGTTCTGGCCTACAACAGGGCGTGTTGATAATGTGTATGGCGACCGCAACCTCATCTGCACCCTTCTGCCGGCAGCACAGGTCGCCGAAGAACAAGCTGCTGCAACCGCATAG 3126 0.477 MERARRLANRAILKRLLSQTKQHRHHEPLSNSSSSSPVLYSPSRCVSTVTPSVLRNRASFHHFSQQQTRRISVTALQPSDTFPRRHNSATKEEQSKMSQSCGFDSLDSLIDATVPKSIRLNDFAFSKFDAGLTEGQMIEHMKDLASKNKVFKSFIGMGYYNTHVPPVILRNIMENPAWYTQYTPYQAEISQGRLESLLNFQTMITDLTGLPMSNASLLDEGTAAAEAMSMCNNIQKGKKKTFVIASNCHPQTIDICKTRAAGFDLEVATVDLKDIDYSKGDVCGVLVQYPGTEGEILDYGEFIKKAHAHGVKVVMASDLLALTVLKPPGELGADIVVGSAQRFGVPMGYGGPHAAFLATSQEYKRMMPGRIIGVSVDSSGKSALRMAMQTREQHIRRDKATSNICTAQALLANMAAMFAVYHGPEGLKTIAQRVHGLAGVFALGLKKLGVEVQGLPFFDTVKVKVPNAHAIADAAVESEINLRVVDGKTITVAFDETTSLEDVDTLFKVFAGGKPVSFTAASLAPEVESAIPSGLTRESPYLTHPIFNTYHTEHELLRYIHRLQSKDLSLCHSMIPLGSCTMKLNATTEMMPVTWPSFTDIHPFAPTEQAQGYQEMFDNLGDLLCTITGFDSFSLQPNAGAAGEYAGLMVIRAYHLARGDHHRNVCIIPVSAHGTNPASAAMCGMKIVSVGTDAKGNINIAELRKAAETHKDNLSALMVTYPSTHGVYEEGIDEICKIIHDNGGQVYMDGANMNAQVGLTSPGWIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPAPENSQPLGTISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILNANYMAKRLENHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAEIEKGKADINNNVLKGAPHPPSLLMGDAWTKPYSREYAAFPAPWLRVAKFWPTTGRVDNVYGDRNLICTLLPAAQVAEEQAAATA* 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3320 1041 CDD GDC-P 134 510 IPR020581 GO:0004375|GO:0006546
Ahy16g3320 1041 PANTHER GLYCINE DEHYDROGENASE, DECARBOXYLATING 1 1041 IPR020581 GO:0004375|GO:0006546
Ahy16g3320 1041 TIGRFAM gcvP: glycine dehydrogenase 85 1025 IPR003437 GO:0004375|GO:0006544
Ahy16g3320 1041 MobiDBLite consensus disorder prediction 18 41 - -
Ahy16g3320 1041 SUPERFAMILY PLP-dependent transferases 85 510 IPR015424 -
Ahy16g3320 1041 SUPERFAMILY PLP-dependent transferases 537 1026 IPR015424 -
Ahy16g3320 1041 Gene3D - 165 425 IPR015421 GO:0003824
Ahy16g3320 1041 Gene3D - 592 829 IPR015421 GO:0003824
Ahy16g3320 1041 CDD GDC-P 553 948 IPR020581 GO:0004375|GO:0006546
Ahy16g3320 1041 Hamap Glycine dehydrogenase (decarboxylating) [gcvP]. 76 1032 IPR003437 GO:0004375|GO:0006544
Ahy16g3320 1041 Pfam Glycine cleavage system P-protein 85 510 IPR020581 GO:0004375|GO:0006546
Ahy16g3320 1041 Pfam Glycine cleavage system P-protein 527 803 IPR020581 GO:0004375|GO:0006546
Ahy16g3320 1041 PANTHER GLYCINE CLEAVAGE SYSTEM P PROTEIN 1 1041 - -
Ahy16g3320 1041 Gene3D Aspartate Aminotransferase, domain 1 840 979 IPR015422 GO:0003824
Ahy16g3320 1041 Gene3D Aspartate Aminotransferase, domain 1 154 506 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3320 Ahy-Chr16 150155071 150162525 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3320 K00281 - gmx:100819714 1860.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3320 16 150155071 150162525 Ahy16g3320 16 150155071 150162525 ECH
Ahy16g3320 16 150155071 150162525 Ahy6g2613 6 111398220 111405330 hybridization