Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3314 ATGTTTGAGGAATCATTGTCATCATCAACATCCTCCCTCACCAGTTGGTTCACCCCAACCATGTTTTTCCTCCTTCTCCAACTTGTTATTGCCACCATTTACATCATCTCCTCTCTCACCAACAACAATGCCAAGCATCATGAACATCATGAACCACAACAACCACTTGCAAGATCCCCTTCTCTCTTGCATAGACTCAAATCCCTAAACTTTTATAACTACCACGAACAACAACCACAACAACAACTTCCACATGAAATCAATAACTACTTATTCCAACAACAACCACTTGCTACATCTCCTTCTCTATTGCAAAGGCTTAAATCCATTAATTTTTACTCTAACCACCCTCATCACACTTCCCAAGAACCTCAACAAACTCAACAACTTCCCAGATCTCCCTCCTCAGTCATCCAACGCCTCAAATCCATTAACCTTCAAACTTATTTCCCAACTGAAACTTTATCTTCCTATTTTACCCCTGAACAACCAAAGAAAAAAACGCACGTGCCGAAAATACCAAAAGTGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAATATGACGATGGAGATGTAGTTGGAGAAATAATGTTCCGCAATAACAACAATCATGACGTGGATGAGGATTCTTGCGCTTCCATGGACGAGATTTTCAGCAAGCTGCAGCAAGGGCAAACTGGTAATTTCACAAGAACGCATTCCGACACTAAACCGGCCTCCGGCGAGGTTCCGGTTAAGCTTCCGAGGAAGATGAAGAAGTCGGCGAGCACCAAATCGGCGTTCTCGCACTTCGAGGAGGTCGACATTGTGGAAACCCGCCGTCCGGCCACCGCGAGGGAGAGTGGCGCCGCCGCAGAAGAAGGCGGAGGTGACGGCGGCGTTGACGCAAAGGCGGACGACTTCATTAACCGGTTCAAGCAGCAGCTGAAGCTTCAGAGGCTGGATTCAATAATGAGGTATAAGGAGATGATTGGCAGAGGGACTGCCAAGTAA 999 0.4565 MFEESLSSSTSSLTSWFTPTMFFLLLQLVIATIYIISSLTNNNAKHHEHHEPQQPLARSPSLLHRLKSLNFYNYHEQQPQQQLPHEINNYLFQQQPLATSPSLLQRLKSINFYSNHPHHTSQEPQQTQQLPRSPSSVIQRLKSINLQTYFPTETLSSYFTPEQPKKKTHVPKIPKVKKEEEEEEEEEEYDDGDVVGEIMFRNNNNHDVDEDSCASMDEIFSKLQQGQTGNFTRTHSDTKPASGEVPVKLPRKMKKSASTKSAFSHFEEVDIVETRRPATARESGAAAEEGGGDGGVDAKADDFINRFKQQLKLQRLDSIMRYKEMIGRGTAK* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3314 332 PANTHER COTTON FIBER (DUF761) 80 116 - -
Ahy16g3314 332 PANTHER COTTON FIBER (DUF761) 119 330 - -
Ahy16g3314 332 MobiDBLite consensus disorder prediction 275 297 - -
Ahy16g3314 332 MobiDBLite consensus disorder prediction 161 191 - -
Ahy16g3314 332 MobiDBLite consensus disorder prediction 165 179 - -
Ahy16g3314 332 PANTHER OS06G0566500 PROTEIN 1 79 - -
Ahy16g3314 332 PANTHER OS06G0566500 PROTEIN 80 116 - -
Ahy16g3314 332 Pfam Cotton fibre expressed protein 294 327 IPR008480 -
Ahy16g3314 332 MobiDBLite consensus disorder prediction 114 135 - -
Ahy16g3314 332 PANTHER COTTON FIBER (DUF761) 1 79 - -
Ahy16g3314 332 PANTHER OS06G0566500 PROTEIN 119 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3314 Ahy-Chr16 150102269 150103688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3314 - - adu:107495638 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3314 16 150102269 150103688 Ahy16g3314 16 150102269 150103688 ECH
Ahy16g3314 16 150102269 150103688 Ahy6g2610 6 111362172 111363176 hybridization