Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3312 ATGCGAAAAGTAAGTGAGAAGCGGAGAATAATTATACGAAACTACCATGGCGAAAATCTTGTGGGGATCTTACACGATGCTGAATCCACACAACTTGTTATTATCTGCCATGGCTTCCAATCTTCCAAGGAAAGGATTCCAATGGTGAATCTTGCTGCTGCTATTGAAAATGATGGAATTAGTGCCTTCCGCTTTGATTTTTCTGGAAATGGGGAAAGTGAAGGTTCATTTCAGTATGGTAACTACTACAGAGAAGTTGAAGACTTGCGTGCTGTCATTCAACACTTTCGTGAGCAGAAATTTGTAATTACAGCAATTGTTGGTCATAGTAAAGGGGGTAACGTGGCACTGTTATACGCCTCAAAATATAAGGATGTTCATGCTATTGTCAACATTTCTGGCCGGTTTAATCTATTGAAGGGCATGGAAGGTCGTTTGGGCGAAAATTTTGTTAAACGAATCAAACAAGATGGATTTATTGATGTAAAAAATAGAAGAGGGAACATTATATATCGTGTTACTGAAGAAAGTTTGATGGATCGCCTATCCACTATTACTCATCTTGCTTGCCTATTAATTCCTCAAGATTGCAGAGTGCTAACAGTTCATGGATCCAAGGATGAAACTGTACCCTCCGAAGATGCTCTAGATTTCGATAAGTTCATATCTAACCATGAACTGCACATTGTAGAAAGAGCCGATCACGAATTTACACATCATCAAGATGAGTTAACCAGCATAGTCTTGGAGTTTATCAAGTCTCATAATGATAAAGACACAAATAAATCTAAGCACACACAACATGGAGGAGTCGATAAACCTATTCGGTCGCGAATCTAG 840 0.3881 MRKVSEKRRIIIRNYHGENLVGILHDAESTQLVIICHGFQSSKERIPMVNLAAAIENDGISAFRFDFSGNGESEGSFQYGNYYREVEDLRAVIQHFREQKFVITAIVGHSKGGNVALLYASKYKDVHAIVNISGRFNLLKGMEGRLGENFVKRIKQDGFIDVKNRRGNIIYRVTEESLMDRLSTITHLACLLIPQDCRVLTVHGSKDETVPSEDALDFDKFISNHELHIVERADHEFTHHQDELTSIVLEFIKSHNDKDTNKSKHTQHGGVDKPIRSRI* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3312 279 Gene3D alpha/beta hydrolase 3 275 IPR029058 -
Ahy16g3312 279 Coils Coil 279 279 - -
Ahy16g3312 279 SUPERFAMILY alpha/beta-Hydrolases 7 260 IPR029058 -
Ahy16g3312 279 MobiDBLite consensus disorder prediction 258 279 - -
Ahy16g3312 279 PANTHER RE40534P-RELATED 4 261 - -
Ahy16g3312 279 Pfam Serine aminopeptidase, S33 29 139 IPR022742 -
Ahy16g3312 279 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3312 Ahy-Chr16 150061440 150064292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3312 28 125 Acyl Lipid Metabolism Gene Families AT2G39400 32.353 7.25e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3312 K06889 - gmx:100776424 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3312 16 150061440 150064292 Ahy16g3312 16 150061440 150064292 ECH
Ahy16g3312 16 150061440 150064292 Ahy6g2608 6 111333381 111335245 hybridization