Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3305 ATGCAGGGGCTACGGCGGTGCTCAAACGACGTCGTTCAGCTGGACCTATCCACTACAGTGACGACCACAAACACATCATCAACCTCACTCTCCATCGACGTTGAGGAATCAGTGGAGACCAAGATCCAACGGCTCATAACAGAGCACCCAGTCATCATATTCACACGATCTTCTTGCTGCATGTGCCACGTCATGAAGAAGCTTCTCGCTACCATCGGAGTTAACCCAACCGTCATCGAATTGGACGACCACGAGATCGCCGCCCTCCCTTCCTCCTCCGAAGACGGACCTGGTGCCGCCTCCAATCTCCGGAACCGCACCCCCGCCGTCTTCATAGGTGGCGCCTGTGTTGGTGGTCTCGAGTCCCTCGTGGCTCTCCACGTCAGCGGTCACCTTGTTCCTAAGCTCGTTCAAGTCGGTGCTCTCTGGGTATGA 435 0.5632 MQGLRRCSNDVVQLDLSTTVTTTNTSSTSLSIDVEESVETKIQRLITEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEIAALPSSSEDGPGAASNLRNRTPAVFIGGACVGGLESLVALHVSGHLVPKLVQVGALWV* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3305 144 PANTHER GLUTAREDOXIN 5 143 IPR011905 -
Ahy16g3305 144 SUPERFAMILY Thioredoxin-like 40 143 IPR036249 -
Ahy16g3305 144 TIGRFAM GlrX-like_plant: glutaredoxin-like family 42 144 IPR011905 -
Ahy16g3305 144 ProSiteProfiles Glutaredoxin domain profile. 39 143 - -
Ahy16g3305 144 PRINTS Glutaredoxin signature 100 113 IPR014025 -
Ahy16g3305 144 PRINTS Glutaredoxin signature 114 127 IPR014025 -
Ahy16g3305 144 PRINTS Glutaredoxin signature 51 69 IPR014025 -
Ahy16g3305 144 PANTHER GLUTAREDOXIN-C6 5 143 - -
Ahy16g3305 144 Gene3D Glutaredoxin 32 143 - -
Ahy16g3305 144 CDD GRX_GRXh_1_2_like 50 135 - -
Ahy16g3305 144 Pfam Glutaredoxin 51 116 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3305 Ahy-Chr16 149971147 149971768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3305 42 144 Miscellaneous Gene Families AT4G15690 40.777 3.35e-23 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3305 - - adu:107495514 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3305 16 149971147 149971768 Ahy6g2602 6 111257942 111258586 hybridization
Ahy16g3305 16 149971147 149971768 Ahy17g3156 17 133351016 133352351 PCT
Ahy16g3305 16 149971147 149971768 Ahy8g0868 8 16924462 16925876 PCT
Ahy17g3156 17 133351016 133352351 Ahy16g3305 16 149971147 149971768 PCT
Ahy8g0868 8 16924462 16925876 Ahy16g3305 16 149971147 149971768 PCT