Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3288 ATGATAGCGTACCTGGAACACTTCGTTCACGGAAACGACGCCGAATCGAGGCAAGACGACACCGACGGCGACGTCGTTTCGTCCCTCGACGGCCTCGAAATCACAACAGCCACCGCCTCCGCCGGCAAAGACTTCGGCGGCACAAAATTCTCGAAGCCGCTCGCAGTCATCCGTCCATCCTCCGCCGTCGACATCGCTCGTGCCGTCCGAGCTGCGGCGGCCACGGCGAATCTCACGGTGGCGGCTCGAGGCAACGGTCACTCCATCAACGGCCAAGCCATGGCGCACAGAGGCTTGGTCCTCGACATGCGCGCCATGGAGAATCACTGTTTTCGTTTCGGTGCTGAAAACGGTAGCGGTGGTTTGCGATACGTCGACGTTCCGGGAGGGGCATTATGGGAAGACGTGTTGAAACGGTGCGTTTCGCAGTTCGGTTTGGCGCCGAGGTCGTGGACGGATTATTTGGGTTTAACGGTTGGGGGAACGCTGTCTAACGGCGGCGTTAGTGGACAGGCGTTCCGTTACGGACCTCAGACGGCAAACGTGACGGAGATGGAGGTTGTTACTGGGAGAGGCGAAACGGTTATCTGCTCTGAAAAGCAGAATTCGGAACTTTTCTTTGCCGCGCTTGGTGGTCTTGGACAGTTCGGTATCATTACCAGAGCTAGAGTCCTTCTTCAACAAGCTCCAGACATGGTGAGGTGGATAAGGGTAGTGTACTCAGAATTTGAGGCGTACACAAGGGACGCGGAGTGGCTAGTGAGTTTGAGAGAAGGAGAAGGTTTTGACTACGTGGAAGGCTTTGTCTTTGTGAACAGCGATGACCCTTGCAACGGCTGGCCCACAGTGCCCATTCACCCTAACCAACGGTTCGACCCGGTTCGTCTCCCTTCCAACGCTGGACCCGTCCTCTATTGCTTAGAACTCGCCCTTCATTATCGTCACTCCCACCATCCTTCAACTCTTGATATGGAAGTAGAGAAATTAGTTGGACGGTTGCGATTCGTGGAGGGTGTAAAGTTCGAAGTGGACGTGAGCTACATGGAATTCTTGCTACGTGTGAAGCGTGTTGAAGAGGAAGCAAAAGTAAAAGGGATATGGGATGCACCTCATCCATGGCTGAACATGTTTATATCAAAGTCCAACATTGCTGAGTTTGATCGTGAAGTCTTCAAGAAAATCATCAAGAATGGTGTTGGTGGCCCCATTTTAGTGTATCCCCTCTTGCGAAGCAAGTGGGATAGTCGTCACTCGGTTATGGTGCCAGAAAGCAGTAACATATTCTACATAGTAGCATTGCTAAGATTTGTTCCAGCAGCACCAAAGGGACCACATGCTGAAATCTTAGTGGCACAAAACAATGCAATTATTCAATTGTGTTACAACAGAGGCTTTGATTTCAAGCTGTATCTTCCTCACTACAACTCACAAGAGAATTGGATGCGACACTTTGGGGATAAGTGGACAAGGTTCATTGATAGAAAGGCCAATTTTGATCCCTTGGCTCTTCTTGCTCCTGGCCAGAAAATTTTTTCCAGAATCCCCCAACCTTTGTCTATCACATAA 1566 0.5096 MIAYLEHFVHGNDAESRQDDTDGDVVSSLDGLEITTATASAGKDFGGTKFSKPLAVIRPSSAVDIARAVRAAAATANLTVAARGNGHSINGQAMAHRGLVLDMRAMENHCFRFGAENGSGGLRYVDVPGGALWEDVLKRCVSQFGLAPRSWTDYLGLTVGGTLSNGGVSGQAFRYGPQTANVTEMEVVTGRGETVICSEKQNSELFFAALGGLGQFGIITRARVLLQQAPDMVRWIRVVYSEFEAYTRDAEWLVSLREGEGFDYVEGFVFVNSDDPCNGWPTVPIHPNQRFDPVRLPSNAGPVLYCLELALHYRHSHHPSTLDMEVEKLVGRLRFVEGVKFEVDVSYMEFLLRVKRVEEEAKVKGIWDAPHPWLNMFISKSNIAEFDREVFKKIIKNGVGGPILVYPLLRSKWDSRHSVMVPESSNIFYIVALLRFVPAAPKGPHAEILVAQNNAIIQLCYNRGFDFKLYLPHYNSQENWMRHFGDKWTRFIDRKANFDPLALLAPGQKIFSRIPQPLSIT* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3288 521 PANTHER CYTOKININ DEHYDROGENASE 7 12 516 - -
Ahy16g3288 521 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 230 511 IPR015345 GO:0009690|GO:0019139|GO:0050660
Ahy16g3288 521 SUPERFAMILY FAD-binding/transporter-associated domain-like 39 226 IPR036318 GO:0050660
Ahy16g3288 521 ProSiteProfiles PCMH-type FAD-binding domain profile. 49 229 IPR016166 GO:0071949
Ahy16g3288 521 Pfam FAD binding domain 53 198 IPR006094 GO:0050660
Ahy16g3288 521 Gene3D - 103 231 IPR016169 -
Ahy16g3288 521 Gene3D - 233 470 IPR016170 -
Ahy16g3288 521 PANTHER GULONOLACTONE OXIDASE 12 516 - -
Ahy16g3288 521 Gene3D - 41 512 IPR016167 -
Ahy16g3288 521 SUPERFAMILY FAD-linked oxidases, C-terminal domain 230 511 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3288 Ahy-Chr16 149676645 149683319 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3288 K00279 - gmx:100816566 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3288 16 149676645 149683319 Ahy16g3288 16 149676645 149683319 ECH
Ahy16g3288 16 149676645 149683319 Ahy6g2587 6 111030939 111055556 hybridization