Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3285 ATGGGTGAGGCTCCTCAACTTCTCTATGTTAATGGTTTCTCAAAATTTTGCCATGTAACTCAAAAAAACCATGCCAATGGTATTCTTCATAATAATAATAACCACCATGAGTTCTCAAGGTTTGGCCCTGAAAATCAACAAAAGAATGGAAGTAATGGTAACTATGATTCCTCATCATGGTATGAGGAAGTCATTGACGATGATCTCAAATGGTCCTTCAAACTCAATAGGGTGCTCCACAAAGGGGTTAGCAAGTACCAAGACATAGCTCTTTTGGATACAAAGCGTTTTGGAAAGGCTTTGATGATTGATGGAAAGATGCAGAGTGCTGAATCAGATGAGTTTATTTATCATGAATGCTTGATTCATCCCTCCCTTTTATGCCACCCCAACCCAAAAAAGGTGTTTATTATGGGAGGAGGTGAAGGTTCTGCTGCTAGGGAAGCCCTCAAACATAAGACAATAGACAAAGTTGTCATGTGCGACATAGACCAGGAGGTGGTAGATTTCTGTAGGAAATATTTGACTGTGAATAGGGAGACATTTTATCACAGGAAGCTTGACCTTGTCATCAATGATGCCAAGGCTGAGTTGGAAAAGAGAAAGGAGAAGTATGATGTGATTGTTGGAGATTTGGCTGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACCAAATCCTTTTATGAGAAAATCTTGAAGCCCAAGCTCAATGATCATGGCATTTTTGTCACCCAGGCTGGACCAGCAGGTATATTCACACACAAGGAGGTCTTCACTTCCATATATAACACAATCAAACAGGTCTTCAACTATGTGATGGTATATTCCACTCATGTACCATCTTTTGCTGATACATGGGGATGGGTTATGGCTTCTGATGAACCATTATCAATTGGTGCTGAGGAAATGGACAAAAGAATCAAAGCAAGGATAGATGGAGAATTGCTTTATCTAAATGGTGCTTGGTTCCAATCAGCTGCTACCATGAATAAGACTGTTTCACAATCGTTGAAGAACGAAACTCACGTGTACACAGAAGAAAATGCTAGATTTATTCCTGGGCATGGTGTGGCTTATCGTCTCTAA 1092 0.4048 MGEAPQLLYVNGFSKFCHVTQKNHANGILHNNNNHHEFSRFGPENQQKNGSNGNYDSSSWYEEVIDDDLKWSFKLNRVLHKGVSKYQDIALLDTKRFGKALMIDGKMQSAESDEFIYHECLIHPSLLCHPNPKKVFIMGGGEGSAAREALKHKTIDKVVMCDIDQEVVDFCRKYLTVNRETFYHRKLDLVINDAKAELEKRKEKYDVIVGDLADPLEDGPCYQLYTKSFYEKILKPKLNDHGIFVTQAGPAGIFTHKEVFTSIYNTIKQVFNYVMVYSTHVPSFADTWGWVMASDEPLSIGAEEMDKRIKARIDGELLYLNGAWFQSAATMNKTVSQSLKNETHVYTEENARFIPGHGVAYRL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3285 363 PANTHER THERMOSPERMINE SYNTHASE ACAULIS5 54 362 - -
Ahy16g3285 363 PANTHER BNAA02G04280D PROTEIN 54 362 - -
Ahy16g3285 363 Gene3D Vaccinia Virus protein VP39 111 362 IPR029063 -
Ahy16g3285 363 Gene3D Spermidine synthase, tetramerisation domain 58 110 IPR037163 -
Ahy16g3285 363 Hamap Polyamine aminopropyltransferase [speE]. 59 340 IPR001045 GO:0003824
Ahy16g3285 363 Pfam Spermine/spermidine synthase domain 114 292 - -
Ahy16g3285 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 59 339 IPR029063 -
Ahy16g3285 363 Pfam Spermidine synthase tetramerisation domain 60 111 IPR035246 -
Ahy16g3285 363 ProSiteProfiles Polyamine biosynthesis (PABS) domain profile. 58 295 IPR030374 -
Ahy16g3285 363 MobiDBLite consensus disorder prediction 34 53 - -
Ahy16g3285 363 CDD AdoMet_MTases 139 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3285 Ahy-Chr16 149586208 149591673 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3285 K18787 - gmx:100784972 582.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3285 16 149586208 149591673 Ahy16g3285 16 149586208 149591673 ECH
Ahy16g3285 16 149586208 149591673 Ahy6g2586 6 110952597 110957956 hybridization